| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0742 |
|---|
| Symbol | |
|---|
| ID | 5136719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 769482 |
|---|
| End bp | 769931 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640532200 |
|---|
| Product | phage protein GP46 |
|---|
| Protein accession | YP_001216692 |
|---|
| Protein GI | 147675244 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4381] Mu-like prophage protein gp46 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCA TCTTGCTGAA CATGTTGGAA AACACTGGAG TCATCATCGA GGGCGAAGTT
CCTGAGCAAT CAGTAACCGC CCTCGTTTTG ATCTCGTTGT TTACTGACGC CAGAGCGGAA
AGCTCAGACA CCATTCCAGA TGGAACCGCA GATCAGCGCG GTTGGCCTGG TGATTCATTT
TATGATGCGG CTTGGGGTTC CAAGCTTTGG CTTTTGTATC GAGAGAAGTT AACCACCGAT
GTGCGCAACC GTGCTGTTAA GTACGCAGAA GACGCGCTGG CATGGATGAC GAAGGACTCA
GGCACTGGAA AGATTGCCAA GAGCGTGACG GTTGAGGGTT CAATCCCAAG GTTTCAAACC
TTGGCCTTAA CCATCACGAT CACAAAGCCA GACGAAACCG AGCTGACTTT AACTGTATCC
AAACGATGGG AGGCGCAAAG TGCCCTATAG
|
|---|
| Protein sequence | MSSILLNMLE NTGVIIEGEV PEQSVTALVL ISLFTDARAE SSDTIPDGTA DQRGWPGDSF
YDAAWGSKLW LLYREKLTTD VRNRAVKYAE DALAWMTKDS GTGKIAKSVT VEGSIPRFQT
LALTITITKP DETELTLTVS KRWEAQSAL
|
|---|
| |