Gene VC0395_A0737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0737 
Symbol 
ID5135315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp765280 
End bp766038 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content50% 
IMG OID640532195 
Productproton/glutamate symporter 
Protein accessionYP_001216687 
Protein GI147674816 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0146822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCATTT TTATAGTCTC GATTGCTCAT TTCTCGCGGC TCGCTACAAC CATTGTTGAT 
GCCATGGTGT GGATGATCAA TAAAGTGATG CTGATTGCGC CGATTGGTGT ATTTGGCTTA
ATGGCTGATG CCGTGGGTAC TTTTGGTTTC AGCGCGCTGA TGGTGGTGTT TAAGCTGTTC
GTCGTTTACG TAGCGGCGAT TGCGATTTTT GGCTTTGTGG CTTACCCAGT CATGATCCAA
CTGTTCAGCA AAACATCGGC GAAAAAGTTC ATTCAAGCAA TGAAAAAGCC ACAAGCGGTT
GCACTGTCTA CGGCCTCTTC TATGGCGACA CTGCCTGTCA CTATGGATAC GGTGAAAAAC
GATCTGGGTG TGCGCAACTC AACGGCTTCT TTCGTACTGC CTTTGGGCGC GACCATCAAT
ATGTCAGGTA ACGCGATCTA CTACGGTCTG GTGGCTATCT TCTTTGCTCA GCTGTTTAAT
ATTGACCTGA GCATGGGCGC TTACATTGCG ATCATCGTGA CGGCGACTTT AGGTGCGGTT
GGTCAAGCGG GTGTTCCGGG GCCTTCATTC CTTGTGGTGG CGGTTCTGCT CTCTGCCGGT
ATTCCTATTG AAGGTCTACC ACTGCTGTTT GCACTGGATC GTATCTTTGA CATGATCCGT
ACTGCGCTCA ACATTACCGG CGATGCGGCT TGTGCAGTGA TTGTGGATTC GATGATCACT
GAGGAAGCGG CGGCTGAGCT GGAAAAACGT GAAGCTTAA
 
Protein sequence
MLIFIVSIAH FSRLATTIVD AMVWMINKVM LIAPIGVFGL MADAVGTFGF SALMVVFKLF 
VVYVAAIAIF GFVAYPVMIQ LFSKTSAKKF IQAMKKPQAV ALSTASSMAT LPVTMDTVKN
DLGVRNSTAS FVLPLGATIN MSGNAIYYGL VAIFFAQLFN IDLSMGAYIA IIVTATLGAV
GQAGVPGPSF LVVAVLLSAG IPIEGLPLLF ALDRIFDMIR TALNITGDAA CAVIVDSMIT
EEAAAELEKR EA