Gene VC0395_A0706 details

Gene Information

• Locus tag: VC0395_A0706
• Symbol: hisH
• ID: 5135385
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 730246
• End bp: 730857
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640532164
• Product: imidazole glycerol phosphate synthase subunit HisH
• Protein accession: YP_001216656
• Protein GI: 147675540
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0118] Glutamine amidotransferase
• TIGRFAM ID: [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCAGA ATGTGGTGAT TATTGATACT GGCTGCGCCA ATATCTCCTC GGTCAAATTC 
GCCATTGAAC GATTAGGTTA TGCGGTGACG ATTTCGCGCG ATCCGCAAGT GGTACTCGCG 
GCAGATAAAC TGTTTCTGCC CGGAGTTGGC ACCGCGAGCG AAGCGATGAA AAACCTCACC 
GAACGTGATT TGATCGAGTT GGTGAAACGG GTTGAGAAAC CATTGCTTGG CATCTGCCTT 
GGCATGCAAT TGCTTGGCAA ATTGTCGGAA GAAAAAGGCC AGAAAGCCGA TGAGATTGTG 
CAGTGCTTAG GGTTAGTCGA TGGCGAAGTC CGTTTGCTGC AAACCGGCGA TCTGCCGTTG 
CCACACATGG GCTGGAACAC GGTGCAAGTG AAAGAGGGGC ATCCACTGTT TAACGGTATA 
GAACCTGATG CGTACTTCTA CTTTGTGCAC AGCTTTGCCA TGCCCGTTGG CGATTACACC 
ATTGCCCAGT GCGAATATGG TCAGCCGTTT AGCGCAGCGA TTCAAGCAGG GAACTATTAC 
GGGGTGCAAT TTCACCCTGA GCGCTCTTCA AAAGCGGGCG CACGCTTGAT TCAAAACTTT 
CTTGAGCTTT AG 

 

Protein sequence

MTQNVVIIDT GCANISSVKF AIERLGYAVT ISRDPQVVLA ADKLFLPGVG TASEAMKNLT 
ERDLIELVKR VEKPLLGICL GMQLLGKLSE EKGQKADEIV QCLGLVDGEV RLLQTGDLPL 
PHMGWNTVQV KEGHPLFNGI EPDAYFYFVH SFAMPVGDYT IAQCEYGQPF SAAIQAGNYY 
GVQFHPERSS KAGARLIQNF LEL