| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0647 |
|---|
| Symbol | gsk-1 |
|---|
| ID | 5135622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 687552 |
|---|
| End bp | 688856 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640532105 |
|---|
| Product | inosine-guanosine kinase |
|---|
| Protein accession | YP_001216597 |
|---|
| Protein GI | 147675110 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.243174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTC CTGGCCAACG CAAATCTAAG CATTATTTTC CGGTTCACGC GCGTGATCCT
CTGGTCATTC AAGCGCAAGA AAATAAGAAG ATGTCGCGCA CCCACATTAT CGGTATTGAT
CAAACCCTAG TGGATATTGA GGCCAAAGTC GATTCAGATT TGATTGAACG TTATGGTTTA
AGTAAAGGAC ACTCATTGGT CATTGATGAT CATGCTGCAG AAGCGTTATA CAACGAATTA
AAAGAGCAGC GTTTGATTAC CAATGAATAT GCAGGTGGAA CCATAGGGAA TACGCTGCAT
AATTACTCCG TGCTTGCGGA TGATCGCTCC ACGCTACTGG GTGTGATGAG CCAAGATATT
AAAATTGGCA GTTACGGTTA TCGCTATCTG TGTAACACTT CTAGCCGCAT GGATCTCAAC
TATCTGCAAG GTGTAGATGG CGCGATTGGC CGCTGCTTTG CCTTAATTAC CGAAGATGGT
GAACGTACTT TCGCGATCAG CGAAGGTCAA ATGAACCAAT TACGCCCAGA CAGTATTCCT
GAAAAAATAT TTGCTAGTGC CTCTGCATTA GTGATCACGG CTTATTTAGT TCGTTGTAAA
GAAGGCGATC CAATGCCGGA AGCAACAATG CGTGCCATTG AATATGCCAA AAAATATGAT
GTGCCTGTGG TATTAACCCT AGGTACTAAA TTTGTTATTC AAGATGATCC GAAATTCTGG
CAAGAATTTT TACGTGATCA TGTCACTGTG GTGGCAATGA ATGAAGATGA AGCATTAGCT
TTAACAGGAG AAAGCGATCC GCTCGCAGCC TCAGATAAAG CGTTAGATTG GGTTGATTTA
GTACTGTGTA CTGCAGGCCC AGTCGGTTTA TTTATGGCGG GTTACACCGA AGATTCCGCT
AAACGTGAAA CGTCATTACC GTTATTACCG GGATCGGTCC CAGAATTTAA CCGCTATGAA
TTTAGCCGCC CTGCCCGTAA AGAGAGTTGT ATAAATCCTA TTCGTGTTTA TTCACATATT
TCACCGTATA TAGGCGGTCC AGAGAAGATA AAAAATACCA ATGGTGCTGG AGACGCAGCA
TTATCCGCTC TACTGCATGA TATGGCGGCT AATAAATACC ATAAAGAAAA CGTCCCTAAC
TCAAGTAAGC ATCAACATGA GTTTTTAACC TATTCTTCTT TCTCTCAAGT TTGCAAATAC
TCTAACCGTG CAAGTTATGA AGTATTGGCG CAGCACTCAC CACGTCTTTC ACGTGGTCTT
CCTGAGCGAG AAGATAGCCT TGAAGAGGCT TATTGGGAAA GATAA
|
|---|
| Protein sequence | MKFPGQRKSK HYFPVHARDP LVIQAQENKK MSRTHIIGID QTLVDIEAKV DSDLIERYGL
SKGHSLVIDD HAAEALYNEL KEQRLITNEY AGGTIGNTLH NYSVLADDRS TLLGVMSQDI
KIGSYGYRYL CNTSSRMDLN YLQGVDGAIG RCFALITEDG ERTFAISEGQ MNQLRPDSIP
EKIFASASAL VITAYLVRCK EGDPMPEATM RAIEYAKKYD VPVVLTLGTK FVIQDDPKFW
QEFLRDHVTV VAMNEDEALA LTGESDPLAA SDKALDWVDL VLCTAGPVGL FMAGYTEDSA
KRETSLPLLP GSVPEFNRYE FSRPARKESC INPIRVYSHI SPYIGGPEKI KNTNGAGDAA
LSALLHDMAA NKYHKENVPN SSKHQHEFLT YSSFSQVCKY SNRASYEVLA QHSPRLSRGL
PEREDSLEEA YWER
|
|---|
| |