| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0646 |
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| Symbol | mnmA |
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| ID | 5135414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 686173 |
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| End bp | 687291 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532104 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001216596 |
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| Protein GI | 147673628 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.733011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATGTCTG TAGAGCACAG CGCAAACAGC CAAAAGAAAG TGATTGTCGG TATGTCTGGA
GGGGTTGATT CCTCTGTTTC AGCCTATCTT CTCAAGCAAC AGGGTTACCA AGTGGAAGGC
CTGTTTATGA AAAACTGGGA AGAAGACGAT AACGAAGAGT ATTGTACTGC GGCAGAAGAT
TTAGCAGATG CTCAGGCGGT GTGTGACAAA CTCGGCATCC CACTTCATAC CATTAACTTC
GCAGCAGAAT ACTGGGATAA CGTATTTGAA TACTTCCTCG CGGAATATAA GGCGGGACGT
ACTCCTAACC CAGATATTTT GTGTAATAAA GAGATCAAAT TTAAAGCCTT CTTAGAATTT
GCTGATGAAG TGCTGGATGC GGACTACATT GCTATGGGGC ACTATGTGCG TCGCACCTTC
CCGCAGAATG GCGAAAAACC GCAAATGCTG CGCGGTTTAG ACGGTAATAA AGACCAAAGC
TACTTCCTTT ATACTCTGAG TCATGAGCAA GTGGCGCGTA CCCTATTCCC AGTAGGTGAA
CTAGAAAAAC CTGAAGTACG CCGCATTGCC GAAGAACAAG GCTTAATTAC CGCGAAGAAG
AAAGATTCAA CCGGTATTTG TTTTATCGGT GAACGCAAAT TTACCGACTT CTTATCTCGC
TATTTGCCAG CCCAACCGGG TAAAATTGAA ACCCCGGAAG GCAAAGTGAT TGGTGAGCAC
CAAGGCTTGA TGTACCACAC TCTCGGACAG CGTAAAGGTC TGCACATTGG TGGTATGAAA
GAGAGCAGCG AACAGCCATG GTATGTGGCG GATAAAGATC TCAAACGCAA CGTACTCATC
GCGGTACAAG GCGCGGATCA TCCCCTACTC AAATCGCATG GTTTGGTGGC GGCTCAGTTA
CATTGGGTTG ATCGCACCCC CATCACAGAA CCTGTACGTT GCAGCGTGAA GACGCGTTAT
CGTCAAAGTG ACATCGCTTG TACCATCATT CCCCTGAGTG ATGACCGCAT CAAGGTGATG
TTTGACGAGC CACAAGTGGC CGTGACTCCG GGACAATCCG CCGTCTTTTA TCAAGGTGAA
ATCTGCCTTG GTGGCGGCAT TATTGAAGAG CGCATTTAA
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| Protein sequence | MMSVEHSANS QKKVIVGMSG GVDSSVSAYL LKQQGYQVEG LFMKNWEEDD NEEYCTAAED
LADAQAVCDK LGIPLHTINF AAEYWDNVFE YFLAEYKAGR TPNPDILCNK EIKFKAFLEF
ADEVLDADYI AMGHYVRRTF PQNGEKPQML RGLDGNKDQS YFLYTLSHEQ VARTLFPVGE
LEKPEVRRIA EEQGLITAKK KDSTGICFIG ERKFTDFLSR YLPAQPGKIE TPEGKVIGEH
QGLMYHTLGQ RKGLHIGGMK ESSEQPWYVA DKDLKRNVLI AVQGADHPLL KSHGLVAAQL
HWVDRTPITE PVRCSVKTRY RQSDIACTII PLSDDRIKVM FDEPQVAVTP GQSAVFYQGE
ICLGGGIIEE RI
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