| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0577 |
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| Symbol | |
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| ID | 5137201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 617536 |
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| End bp | 618279 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532035 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001216527 |
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| Protein GI | 147675485 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000000371974 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTATT CAGTCTCAAC AGACGCTTTG AAAGAGAAAG TGATTTTAGT CACCGGAGCG
GGTGATGGTA TTGGTAAGCA AGCGGCGATC AGTTTCGCGG CGCACGGCGC GACCGTGATT
TTACTTGGCC GTACCGTGAA AAAGCTCGAA CAAACCTATG ATGCTATTGA AGCAGCGGGT
TATCCGACAC CGGCGATTGT TCCTTTAGAT ATGAAAGGCG CAACCAAACA AAATTATCTG
GATATGGTCG ATACAATAGA AGATCAATTT GGCCGTTTGG ATGGCGTATT ACACAATGCC
AGCTTGCTTG GCGTACTCAG CCCCTTCGAT CAAATTGGCG AAGACAGCTT CGATGAAGTG
ATGCAAGTGA ACGTGAAAGC ACAGTTCCTT ATGACTCAAG CGCTGCTACC GCTGCTGCAC
AAATCAGCCG ATGCTCGAAT TGTGTTTACC ACGTCTACCG TAGGTCATAT TGGCCGTGCT
TTCTGGGCAA CTTACGCGAT TTCTAAGTTT GCGACTGAAG GTATGATGCA AATTCTGGCC
GATGAATTGA GTGAAAGCAC CATTCGAGTC AATGCGATTA ACCCGGGCGG CACTCGCACC
GCGATGCGCG CGAAAGCCTA CCCAGCAGAG GATGCAGACA AGTTAAAAAC ACCGCTCGAT
ATTATGCCAC TCTATCTGTA CTTGATGGCT CCAGAAGGCC GTGAAGTGCA CGGTCAATGT
ATTGATGCCC AGCCAAAGAA ATAA
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| Protein sequence | MNYSVSTDAL KEKVILVTGA GDGIGKQAAI SFAAHGATVI LLGRTVKKLE QTYDAIEAAG
YPTPAIVPLD MKGATKQNYL DMVDTIEDQF GRLDGVLHNA SLLGVLSPFD QIGEDSFDEV
MQVNVKAQFL MTQALLPLLH KSADARIVFT TSTVGHIGRA FWATYAISKF ATEGMMQILA
DELSESTIRV NAINPGGTRT AMRAKAYPAE DADKLKTPLD IMPLYLYLMA PEGREVHGQC
IDAQPKK
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