| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0576 |
|---|
| Symbol | |
|---|
| ID | 5136318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 617005 |
|---|
| End bp | 617442 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640532034 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001216526 |
|---|
| Protein GI | 147674670 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2983] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0000050037 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACAC CCTTCTGGCA AAGCAAAACG TTAGACCAAA TGACCGAAGC CGAGTGGGAA
TCGCTGTGCG ATGGCTGTGG TAAATGTTGT CTGCACAAAC TCATGGACGA AGATACGGAT
GAAATCTACT ACACCAATGT GGCGTGTAGC TGGCTCAATA GCGACACCTG CTCTTGTAAA
GATTACCCCA ATCGTTTTAG CTCAGGTGAA GAGTGTTTAA AGCTCACTCG CGACAAGATT
GAAGAGTTTA ACTGGCTGCC TGATACCTGC GCTTACCGTT TGCTTGGTAA TGGTCAAACA
CTTCCAGAAT GGCATCCTTT GCTGACCGGC TCGAAAGACG CCATGCATGC CGCCGATGAA
AGTGTGCGCG GTAAAATCGT TTATGAAGTG GATGTGATTG ATTGGGAAGA TCACATTGTG
CTGATGAGTC GAGATTAA
|
|---|
| Protein sequence | MSTPFWQSKT LDQMTEAEWE SLCDGCGKCC LHKLMDEDTD EIYYTNVACS WLNSDTCSCK
DYPNRFSSGE ECLKLTRDKI EEFNWLPDTC AYRLLGNGQT LPEWHPLLTG SKDAMHAADE
SVRGKIVYEV DVIDWEDHIV LMSRD
|
|---|
| |