Gene VC0395_A0574 details

Gene Information

• Locus tag: VC0395_A0574
• Symbol: recR
• ID: 5136842
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 615907
• End bp: 616509
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640532032
• Product: recombination protein RecR
• Protein accession: YP_001216524
• Protein GI: 147673522
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000000000410882
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTACCA GTCACATGCT GGAACATTTG ATGGAAGCAT TACGCTGCCT GCCGGGTGTT 
GGCCCAAAAT CAGCGCAGCG TATGGCATTC CATCTGTTAC AGCGCGATCG TAAAGGTGGT 
TTACAACTGG CTGAGGCACT GAGTCAGGCG ATGGTCGAAA TCGGCCATTG TCAGGAGTGC 
CGAACTTTTA CTGAGCAGGA TGTTTGTCAC ATCTGTAGCA ACCCAAAACG TAAAGAAAAT 
GGTCAGTTGT GTGTGGTTGA AAGCCCAGCA GATATTGCGG CGCTAGAAGC TACCGGTCAA 
TTTTCTGGTC GCTATTTTGT GTTGATGGGG CACTTATCAC CGCTGGATGG TATTGGCCCG 
AGCGATATTG GCCTCGATAC GCTGGATTAT CGCTTGCAAC GCGGTGATAT CAGTGAGGTG 
ATCCTCGCCA CTAACCCGAC GGTGGAAGGT GAGGCGACCG CGCAATACAT TGCCGAGTTG 
TGTCGTGAGC ATCAAGTCAC CGCAAGCCGC ATTGCACATG GTGTTCCCGT GGGCGGCGAA 
CTTGAGTTGG TGGATGGCAC GACCTTATCC CATTCGCTGT TGGGCCGTCA CAAACTGTTT 
TAA 

 

Protein sequence

MRTSHMLEHL MEALRCLPGV GPKSAQRMAF HLLQRDRKGG LQLAEALSQA MVEIGHCQEC 
RTFTEQDVCH ICSNPKRKEN GQLCVVESPA DIAALEATGQ FSGRYFVLMG HLSPLDGIGP 
SDIGLDTLDY RLQRGDISEV ILATNPTVEG EATAQYIAEL CREHQVTASR IAHGVPVGGE 
LELVDGTTLS HSLLGRHKLF