Gene VC0395_A0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0570 
Symbol 
ID5137127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp612320 
End bp612718 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content45% 
IMG OID640532028 
Producthypothetical protein 
Protein accessionYP_001216520 
Protein GI147673072 
COG category[S] Function unknown 
COG ID[COG2832] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000137123 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTCAT CCTTACCACG TTTTTTGTTC AGTGTTATTG GAATAACCAG TCTATGCCTA 
GGGATACTGG GCATATTTCT TCCTCTTCTG CCCACCACCC CCTTTATCTT ACTGTCTAGT
GCTTGTTTTT TACGCAGCAG TCCTCGGTTC TATCGCTGGT TGAATCAACA TGCGACATTT
GGCCCTATGA TTCAAAACTG GCAACAACAT GGCGCGGTCA GTAAAGTGGT GAAAAAGCGT
GCCACACTCT TTATCGTGCT GAGTTTTGCC TTTTCGATCT GGATGGTTCC TTGGCTGTGG
CTCAAGGTTG CGCTGTTTAT CTGGCTTGTG CTTTTGATCA CTTGGTTTAT CCGTTTACCA
ACCCATGAGC TGGTTGCTAA CCAACAAGAA AATCACTAG
 
Protein sequence
MRSSLPRFLF SVIGITSLCL GILGIFLPLL PTTPFILLSS ACFLRSSPRF YRWLNQHATF 
GPMIQNWQQH GAVSKVVKKR ATLFIVLSFA FSIWMVPWLW LKVALFIWLV LLITWFIRLP
THELVANQQE NH