| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0477 |
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| Symbol | rlpB |
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| ID | 5136206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 508742 |
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| End bp | 509383 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531935 |
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| Product | rare lipoprotein B |
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| Protein accession | YP_001216428 |
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| Protein GI | 147674391 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2980] Rare lipoprotein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.421577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCCTAATA ACGAGACTGA AGCATCCATG CGTAACACTC TTTTCCCTAC TTTGAAATGG
TCACTCTTGG TTCTGATGAC AAGCTTACTC ACGGCTTGTG GTTTCCACTT GCGCGGTGAT
TACGATATTC CCCAAGAACT CTCTCGTATG TCACTGACCA GCTATGACCA ATACAGCACC
TTTACTCGTA TGGTGCACCG TCAGTTACGT TTGAATAAAA TCGATCTGCA AGATCCAGCA
GAAGATCTAC CTAATCTACA TCTACTCAGT GAAAGTACTG GTGAACGCAC CCTATCGCTT
TATCAAAATA CGCGTGCAGC CGAAATTGAG CTGACCTTTG TCGCAAGCTA TCGCGTCACC
GTACCTGAGC TGGGCAGTCG CACCTTTACC ACTAGCGTAA CGCGCAGCTA CTTAGATAAC
CCTCTAACAG CCCTAGCAAA ATCCGTTGAG CGCGACATGA TTGAAGATGA AATGCGCAAG
CTAGCTGCCA GCCAAATTGT GCGCCAGATG GCACGTTTAA AAGCAGACTT TGCACGTAAA
ACGTTGGATG ATGAAAGTAT TGAAGGCGAA GGGCTCACTG ACTATCGCGT TGATACGCAA
GAAGTAGCCA ACCCAGTGTC AACAGAAGGC AGCAGTGAGT AG
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| Protein sequence | MPNNETEASM RNTLFPTLKW SLLVLMTSLL TACGFHLRGD YDIPQELSRM SLTSYDQYST
FTRMVHRQLR LNKIDLQDPA EDLPNLHLLS ESTGERTLSL YQNTRAAEIE LTFVASYRVT
VPELGSRTFT TSVTRSYLDN PLTALAKSVE RDMIEDEMRK LAASQIVRQM ARLKADFARK
TLDDESIEGE GLTDYRVDTQ EVANPVSTEG SSE
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