| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0474 |
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| Symbol | |
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| ID | 5135371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 506849 |
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| End bp | 507319 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640531932 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | YP_001216425 |
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| Protein GI | 147674776 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0372612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGATTC AACTGATCGC CGTCGGTACT AAGATGCCTA AATGGGTCGA AGAAGGCTTC
CAAGAGTATC GTCGTCGCTT CCCTCATGAT ATGCCTTTGG AATTGGTAGA AATTACCGCC
GGTAAACGCG GTAAAAATGC TGATATTGCG CGTATCTTAC AAAAAGAGGG CGAAGCGATG
CTGGCCGCAG TGCCCAAAGG CAATCGAATC GTCACCTTAG ATATTCCCGG CAAACGTTGG
GATACGGAAG AGCTCGCAGT ACAGTTGGAA AGCTGGAAAC TGGATGGGCG TGACGTGTCG
ATCCTGATTG GTGGACCAGA AGGCCTTGCG CCCGCCTGTA AAGCCGCGGC AGACCAAAGT
TGGTCTCTTT CTCCACTGAC CTTGCCTCAT CCACTAGTGC GCGTGGTGAT GGCAGAAAGT
TTATACCGTG CGTGGAGCAT TACTACTAAC CACCCTTACC ACCGAGAATA G
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| Protein sequence | MKIQLIAVGT KMPKWVEEGF QEYRRRFPHD MPLELVEITA GKRGKNADIA RILQKEGEAM
LAAVPKGNRI VTLDIPGKRW DTEELAVQLE SWKLDGRDVS ILIGGPEGLA PACKAAADQS
WSLSPLTLPH PLVRVVMAES LYRAWSITTN HPYHRE
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