Gene VC0395_A0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0454 
Symbol 
ID5137683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp482876 
End bp484102 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content35% 
IMG OID640531912 
Producthypothetical protein 
Protein accessionYP_001216405 
Protein GI147673425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGTTAT ACTTAAATCA ATTCAATAAA GAGGGTGGCA TCTTGCGTTA CATATTTATT 
TCACTTGTTC TGTTTAGCCC AGCTATTTTT TCAGAGGTTA ACTCTCACAA TGTCATAGAA
TATGGCGCCA TCGCGAATGA TGGAGAGGAT GATTCGAACG CATTTCAACA TGCACTCAAT
CAATTAAACA ATGGTGATGC CTTAATTATC CCTACAGGAG AATATCAAAT TTGCAAAACG
CTTTATTTAA AAGAAAAGAA TAACATTGAA ATTATTGGTT CTATAAACAG TAAATTAAAG
AAGTGCCGTT CATTTAATGG GGAATACTTA CTCCATATCA CCTACACACA AAATCTGAAG
ATACAAGGCC TCAGTTTTGA AGGACTGAAT AATGGTGACC TCAAACCTTT GTGGGGAGAG
CAAGGTGTCT ACCTTGGCAG CACTAAAGGT ACCTTAGTGG TTCAAAATCA ATTCGCTCGC
TTTGGTGACG CCGCATTGCG CATGACGACG GCAAGTCAGG ACCACTCGAT ACCACCAGGC
TCTATGGCAA TAAAAGTGAG TCATAATCAC TTCGAAGACT GCGCTCAAGT CACTACAACA
CAAGCGACAG CAGGAACAGA AATGCACGGT ACACAGGATA TTATTATTGA TAACAATCAA
TTTAATGCTT GTAAATTAAA ATTATCTGCA CGCGCAGATA CTAGAGGAGC TAAGGTCATT
AATAATCAAT TTGAAAATAT TAATGGTACT TCAAATGAAG TCAGTTATTA TTCTGACGTT
TATTACTCAG GAAACACATT TTTAAATATC AATGGGTTCG CTATCAACAT TTACCCAAAC
TCTAGAACGG AACAAAATGT TCAGTGGGGA AACATCTCCA TTATAGGTAA CACTTTTGAT
GCCATCCAAC AAGGTATACG TTTGCAAAGC TTTAGCATCA ATGACCCAAA CAACCAATCC
ATCAAAAACA TTCAAATTAG TGATAACACA TTTGAAAATA TTTACTTTGG AAATGAAATT
GAAAGTCAAT ATAAAGCCAT TATTAGAACC AATAGCCAAG ATAATCTCGT TTCTTTCGAA
CATGTCAATA TAACTGGTAA TCAATATCAA TTAACGCCTT ATAGTAAATT CATTTCAATT
GATCATAAAA GCAAGTTAAT CAATATTCAA AACAATGAAA GAATTTATAG CGACCATTAT
TATATACAGC ACTTTATTAA AGATTGA
 
Protein sequence
MLLYLNQFNK EGGILRYIFI SLVLFSPAIF SEVNSHNVIE YGAIANDGED DSNAFQHALN 
QLNNGDALII PTGEYQICKT LYLKEKNNIE IIGSINSKLK KCRSFNGEYL LHITYTQNLK
IQGLSFEGLN NGDLKPLWGE QGVYLGSTKG TLVVQNQFAR FGDAALRMTT ASQDHSIPPG
SMAIKVSHNH FEDCAQVTTT QATAGTEMHG TQDIIIDNNQ FNACKLKLSA RADTRGAKVI
NNQFENINGT SNEVSYYSDV YYSGNTFLNI NGFAINIYPN SRTEQNVQWG NISIIGNTFD
AIQQGIRLQS FSINDPNNQS IKNIQISDNT FENIYFGNEI ESQYKAIIRT NSQDNLVSFE
HVNITGNQYQ LTPYSKFISI DHKSKLINIQ NNERIYSDHY YIQHFIKD