Gene VC0395_A0430 details

Gene Information

• Locus tag: VC0395_A0430
• ID: 5135419
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 458718
• End bp: 459278
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640531888
• Product: D,D-heptose 1,7-bisphosphate phosphatase
• Protein accession: YP_001216385
• Protein GI: 147674205
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0241] Histidinol phosphatase and related phosphatases
• TIGRFAM ID: [TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase; [TIGR01656] histidinol-phosphate phosphatase family domain; [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCCAAAC CCGCCGTATT TCTTGATCGT GATGGCGTGA TCAACGTCGA TCATGGTTAC 
GTGCATGATG AGCACGATTT CCAATTTATT GAAGGTGTAT TTGAAGCGAC TGCGGCTTTG 
CAGCGTATGG GGTATTTGTT GGTGCTGGTT ACCAACCAAT CCGGTATTGC GCGTGGCAAA 
TTTAGCGAAG AGCGTTTCAT TTCTCTCACC CAGTGGATGG ACTGGAACTT TGCCGATAAT 
GGCGTTGAGT TTGATGGTAT CTATTATTGT CCGCACCATG CTGAACATGG CATTGGGCAA 
TACAAAGAAG AGTGTGATTG CCGCAAACCT AAGCCGGGCA TGTTTCTCTC GGCGCGCGAT 
TTCCTGAACA TCGACATGGC CAATTCGGTG ATGGTCGGTG ATAAAGCCGA AGATATGATG 
GCAGCTGAAG CGGCGGGTGT AGGCACTAAG ATTTTGGTGC GCACCGGTAA GCCAATCACA 
GAGCAAGGTG AAGCCTTAGC GACCGTGGTG CTCGATAGCA TTCGCGATGT GCCTCATTAT 
CTACTGCGAG TGAAAAAATA A 

 

Protein sequence

MAKPAVFLDR DGVINVDHGY VHDEHDFQFI EGVFEATAAL QRMGYLLVLV TNQSGIARGK 
FSEERFISLT QWMDWNFADN GVEFDGIYYC PHHAEHGIGQ YKEECDCRKP KPGMFLSARD 
FLNIDMANSV MVGDKAEDMM AAEAAGVGTK ILVRTGKPIT EQGEALATVV LDSIRDVPHY 
LLRVKK