| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0347 |
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| Symbol | |
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| ID | 5136179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 372563 |
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| End bp | 375451 |
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| Gene Length | 2889 bp |
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| Protein Length | 962 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640531805 |
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| Product | putative inner membrane protein |
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| Protein accession | YP_001216303 |
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| Protein GI | 147673479 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAACT TTTCTAATGC ATTAGATAAG CTTACTGAAG ATATTTATTC TAATGCTAAT
TTATATCGTT CAGATAATGT TGTAAGACTC TATGCTGATC ATAACTATAC AGGTCACTAT
ATAGATATTG AAAATTCGAC GAAATTCCTA CATGGATTTA ATGATACACT TTCGTCTTGG
ACTATCCCAC ACGGCTGGTC TGTACGATTT TATGAACATG GTGACTATCA AGGACGTTAT
TGGACAAGAG ATGCTTCTGG AAATGAATCA GGATTTAATG ATGTAATTAG CTCTATTGAG
ATATTGAAAA AAACATCTGG GATAAAAGGT AGCTTAATAC GTAATGAGCT TGAATCATTA
AAAAATAGCT ACAGAGAAAT AGATAAATTT CAAGTAATTG TCGGTTATGA AAATGAAACA
CCAATTTATG CCCTTCCTTT AACTGATGAG CTTTTTGCTA AAGCTCAGCT GTACAGTTAT
GGATTAGATG CCAACTTTGT TGACAAACAC TGGAAGTCAT ACCTAAAAAA AGGCCGCTTG
TCTCTTATCC CCGGGGTTCG TGTAGGGAAG GATATTCTTA AAAAGGATGC TGCTGCATTA
GGAGGACATG TAACAACAAA AGGTGCACAA GATTTATGGA GAAGAAAATA CCAAGAAATC
AGCCAAGTTA TGTCAAAGTA TATTGCAACT CTTATTTCAT TTAAAGCAAA GCTAGAGGGA
AAAGAATCAT GGGATATTCA ATCTGAAAAT AAAAATCGTT CAGTTAGATT TAATTTTGGA
TTCGGAATTA CATATTATAA TATGGGTAAT AATGGTAAAG CCCATTCAAG ATATGAAAAT
ATTCCAACTC AAAGCTGGGT CATGACGGGT AAGGATATAA GTTATTCGGT TACGACACCT
GGTGATTTAT TGAGCCTGTT CAGTCTTAAT AATTTTAAAG TGATAGAACC TATCGATTTT
AATTCAGGCT CGAATAATTA TCCACTTTAT CAATTGATGA ACTCCAATTA CGCCGATAAG
TGTTCATATT ATCAAGATGG ATGGTATCCT CGGTGGAATG TGTGTGATAC AAAATTTATA
ACAAGAAATA AAAAATCATA TAATACAAAA GACATCATGT CATATGGATG GCAAGAGTTT
CTAAATTTTA AAATGAACGA TTTGAAGACT GTACAAACAG ATAGAGATAT AGCATATCAA
GTATTGATGG CGATTCTTCC TGTATGGGGA ACTGTTGAAG ATATTAAATC GGGTGATGCA
GGAATGGCAA CTCTTGGTGT GTTAGGTGAC GTAATGTTTT TTTTACCCAT AGCAAAAAGT
GTTTCTAGTA TCGGAAAACT ATCAGCTAAA GCTGCGTCGT CTAAACTACT ACCGAGAAAT
GTTAAGTTTG TTAGAAATGT CATTGGCCTA AACAAACAAG GTAAGTATTC ATTAACATCA
TCGCAAGCTG ATAGAGCTTT CTATAAATTA AAAATACAAG GAAAACTAAA GGAACTCCCT
AAAGTTATAT TAAATGAACT TAATCCTATC GCAGGTTTGG ATCAGCTCGT TGTTACAGGG
ACAAGTAAAT TATATAAAAA ATATTCATCG CGGGTTAGTA TACCTAAAAA AAATATAATA
GGTGATAACT CAGTTGTGTT TTACGATGAT TTAAAGTTTA AATCAGAGGT GTTTTCAGTA
TCATATTTAG ATGATGGTTA TTTAATTATT AATGATCAAT ATCGAGCTGT TTATATTGAT
GGTAACTACT ATAGGGTCGA ATATGATCCA ATACTACGTG CTAATTTCAT TTATGAACAA
AATAGTGGGA GAAGGATAGA AATTATTAAA GATAAAAATG GCAATTGGTC TATTAAAGAA
ATTAATAATG GGATTTGTCC ACTTTTTTCG TTAATGAATA ATACTAAAGC ATGTCATTTC
ACCAACATTG ATGATGCATT AATAAGTATG GGATTTGACC CAAAAACCAG AACAGCATCA
GGATTATTGG AGTTGATTAA TGGTCGATAT GGACCTGATA TTAAAGAATA CTTATTAAAA
TTAAATTCTT CGCTATCTCT TAATTATAAT ATCGATATAG ATACCCTAAA TTGGGTTTTC
GATACTATAG AAAATTCTGG TATGTCTAGA TATGCATTTA CTCCATTTGT AAAAAATACT
GATGCCATCA TGTATGATAT GCTAGGTAAG TTTTATAATA ATAACATGAG TATTAAACCT
GTTTTTTTGA ACAAATCGCA GTACAAAAAA TTAAAGAAAA CTTTAGACTC TGATAAAGAA
TTAATTATAA ATGTAATTTC AGAACAAAGG AAAATTAATC TAAAGGAGGC ACAACAGCTC
TTCGATGAAT TTTATACTTC TGTTACGAAA GATCCTATTT TTGGTTTGGA TTCTATAACA
CACGATAGAC CGGTTATTCA TGTCGTCGGA CACGGTGATG CTGGTGATGA AGTCATCTAC
CCTGGTGATG CAAGCCATTA CTATTACGCT TTCGAGTTAG CTGATATGCT GAAAAATAAA
GGATTAAAGC CGGATTCAAT CATAAAACTT GACTTTTGTT GGAGTGCTTG CTCTCTCAAA
CCAAGTGATT ATTCAAAAAC AGAAGTACTG ACTAGTATGA ATAAGGGGGA TTACACTCCT
TTATTTGGTG ACATTGATGA TAGCTTTCTG GGGGAGTTTG CTAAAGAATT AACGGCAATG
TACCCTACGT TCCGTGGACC AATAATCGGA TACGTAGGGA CAGTATTAAA CACAATTCAA
GATAATGTGT TAACTTTAGC TAATACACAA GGTCGGTTTC ATGCTGTAGA AATGAACTTT
TCTGATGGTA AATTTTTTTT CAAGAAAGAG GATGCAGAAG TTATTTATGG GAGTTATAAA
AATAAATGA
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| Protein sequence | MFNFSNALDK LTEDIYSNAN LYRSDNVVRL YADHNYTGHY IDIENSTKFL HGFNDTLSSW
TIPHGWSVRF YEHGDYQGRY WTRDASGNES GFNDVISSIE ILKKTSGIKG SLIRNELESL
KNSYREIDKF QVIVGYENET PIYALPLTDE LFAKAQLYSY GLDANFVDKH WKSYLKKGRL
SLIPGVRVGK DILKKDAAAL GGHVTTKGAQ DLWRRKYQEI SQVMSKYIAT LISFKAKLEG
KESWDIQSEN KNRSVRFNFG FGITYYNMGN NGKAHSRYEN IPTQSWVMTG KDISYSVTTP
GDLLSLFSLN NFKVIEPIDF NSGSNNYPLY QLMNSNYADK CSYYQDGWYP RWNVCDTKFI
TRNKKSYNTK DIMSYGWQEF LNFKMNDLKT VQTDRDIAYQ VLMAILPVWG TVEDIKSGDA
GMATLGVLGD VMFFLPIAKS VSSIGKLSAK AASSKLLPRN VKFVRNVIGL NKQGKYSLTS
SQADRAFYKL KIQGKLKELP KVILNELNPI AGLDQLVVTG TSKLYKKYSS RVSIPKKNII
GDNSVVFYDD LKFKSEVFSV SYLDDGYLII NDQYRAVYID GNYYRVEYDP ILRANFIYEQ
NSGRRIEIIK DKNGNWSIKE INNGICPLFS LMNNTKACHF TNIDDALISM GFDPKTRTAS
GLLELINGRY GPDIKEYLLK LNSSLSLNYN IDIDTLNWVF DTIENSGMSR YAFTPFVKNT
DAIMYDMLGK FYNNNMSIKP VFLNKSQYKK LKKTLDSDKE LIINVISEQR KINLKEAQQL
FDEFYTSVTK DPIFGLDSIT HDRPVIHVVG HGDAGDEVIY PGDASHYYYA FELADMLKNK
GLKPDSIIKL DFCWSACSLK PSDYSKTEVL TSMNKGDYTP LFGDIDDSFL GEFAKELTAM
YPTFRGPIIG YVGTVLNTIQ DNVLTLANTQ GRFHAVEMNF SDGKFFFKKE DAEVIYGSYK
NK
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