| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0294 |
|---|
| Symbol | xseA |
|---|
| ID | 5137304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 309183 |
|---|
| End bp | 310523 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640531753 |
|---|
| Product | exodeoxyribonuclease VII large subunit |
|---|
| Protein accession | YP_001216251 |
|---|
| Protein GI | 147675003 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1570] Exonuclease VII, large subunit |
|---|
| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCTTCTT CTCTCGCCAA TCGAAATATC TACACCGTTT CCCGTTTAAA TTCTGAAGTT
CGTTTATTAC TGGAAAATGA AATGGGGATC GTCTGGTTGG TGGGTGAAAT TTCCAACTTC
TCCGCTCCCG TCTCTGGTCA CTGGTATCTC ACTTTAAAAG ACAGCCAAGC GCAGGTTAAA
TGCGCTATGT TCAAAGGCAA TAACCGTCTG GTGAATTTCA AACCGCAAAA TGGTCAGCAA
GTATTAGTTA AAGCTCGACT TTCTCTTTAC GAACCGCGCG GTGACTACCA AATTATTCTT
GAAAGCATGC AACCGGAAGG GGATGGCCGT CTGCAGCAGC AGTTTGAACA ACTGAAGATG
CAGCTCGCCG CCGAAGGTTT GTTTGCTCAG ACACGTAAAA AACCATTGCC GGAAAATCCA
CGCTGCGTGG GGATTATCAC CTCACGGACT GGCGCGGCTT TGCACGATAT TTTGCACGTG
CTTAAGCGCC GTGACCCGAA TCTGCCTGTA GTGATCTACC CCACTCTCGT ACAAGGTGAA
GAGGCAGCTA TTCAAATCGC CCAAGCGATT GGTCGTGCGA ATACACGCGC CGAGTGCGAT
GTGTTGATAG TAGGTCGTGG TGGTGGCTCT TTGGAAGATT TGTGGTGTTT TAACCATGAA
ATCGTGGCAC GTACTATCGC TGCGAGTGAA ATCCCAATTA TCAGTGCTGT AGGCCATGAA
ATCGATGTGA CGATCGCTGA CTTTGTCGCC GATGTGCGTG CCCCTACCCC ATCAGCAGCG
GCGGAATTGG TCAGCCGTGA TCATCGCCAT AAACAGCAAG CACTCCATCA ATGGCAAGCC
AAACTGGCTA GCACCATGCG CCATTATTTG GCGCAGCAAG AGACGCAATT TGCCCGTTTA
CAGCACAAGC TTGATAAACA GCATCCTCAA GCTCGTTTAG AGCGCCAGCA GCAGCAACTT
GATGAGCTCA GCCTGCGTCT TGAGCAAAAG ATGCAGCAAC GTCTGGCAAC TCAGCAGCAA
CGCTGGGATC GCTTAAGCCA TAAGATCGAG CTCCATTCGC CCATTCACTT GATCCGCCAG
CAGCGTTTTA ATCTGATCCA GCAAGAGCAG CGAATAAATC AGTCGATCCA ACGCTATTTG
ATCCAATCAC GCCATCAACT CGCTTTGTTG AGTGAAAAGT TGGATGCGGT CAGCCCTCTT
GCAGCCTTAG CCCGTGGCTA TTCGGTGACA CGTACCACAC AAGGTGAGTT AGTGCGCCAA
AGCGCGCAAG TGAAACCGGG TGACACTTTA GTCACCCAGT TAATGGATGG TGAGATTCTC
TCTACTGTGA ATTCCCGTTA A
|
|---|
| Protein sequence | MSSSLANRNI YTVSRLNSEV RLLLENEMGI VWLVGEISNF SAPVSGHWYL TLKDSQAQVK
CAMFKGNNRL VNFKPQNGQQ VLVKARLSLY EPRGDYQIIL ESMQPEGDGR LQQQFEQLKM
QLAAEGLFAQ TRKKPLPENP RCVGIITSRT GAALHDILHV LKRRDPNLPV VIYPTLVQGE
EAAIQIAQAI GRANTRAECD VLIVGRGGGS LEDLWCFNHE IVARTIAASE IPIISAVGHE
IDVTIADFVA DVRAPTPSAA AELVSRDHRH KQQALHQWQA KLASTMRHYL AQQETQFARL
QHKLDKQHPQ ARLERQQQQL DELSLRLEQK MQQRLATQQQ RWDRLSHKIE LHSPIHLIRQ
QRFNLIQQEQ RINQSIQRYL IQSRHQLALL SEKLDAVSPL AALARGYSVT RTTQGELVRQ
SAQVKPGDTL VTQLMDGEIL STVNSR
|
|---|
| |