| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0214 |
|---|
| Symbol | ileS |
|---|
| ID | 5137625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 219464 |
|---|
| End bp | 222313 |
|---|
| Gene Length | 2850 bp |
|---|
| Protein Length | 949 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640531674 |
|---|
| Product | isoleucyl-tRNA synthetase |
|---|
| Protein accession | YP_001216177 |
|---|
| Protein GI | 147675239 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000786038 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGT ATAAAGATAC CCTGAACCTT CCTGAAACAG GGTTTCCAAT GCGCGGCGAT
CTGGCCAAAC GCGAGCCAGA AATGCTGCAA CGTTGGTATC AAGAAGACCT GTACGGTGCG
ATCCGTCAGG CTAAAAAAGG CAAAAAATCT TTCGTATTAC ACGATGGCCC TCCTTACGCC
AACGGTGATA TTCATATTGG CCACGCTCTG AACAAGATTC TTAAAGACGT CATTATTAAA
TCGAAAACCC TGTCAGGTTT TGATGCGCCT TATATTCCGG GTTGGGATTG CCACGGTCTA
CCGATCGAAT TGATGGTAGA GAAGAAAGTG GGCAAGCCGG GGCAAAAAGT CACCGCGGCC
GAATTTCGTG AAAAGTGTCG CGAATACGCG GCAGGCCAAG TGGAAGGCCA AAAAGAGAGC
TTTAAGCGTC TTGGTATTCT GGGCGAGTGG GATAAGCCTT ATCGCACGAT GGACTTCGTA
ACCGAAGCCA ACATCATCCG TGCACTAGGC AAAATTGCTG ATAACGGCCA CTTGCTGAAA
GGTTTTAAAC CGGTTCACTG GTGTACCGAC TGTGGTTCAG CACTGGCTGA AGCGGAAGTC
GAGTACAAAA ACAAAGTTTC TCCTTCGATT GACGTTCGTT TTAAAGCCGC TGATGAAGCC
GCTGTGCTGG CTAAGTTTGG TCTGGCTGCT GGCCATGAAG GCAAAGGCGA TGTGTCGATT
GTGATCTGGA CAACCACACC TTGGACACTG CCAGCTAACC GCGCGGTATG TCTGCGTGCA
GATTTAGAAT ACGTACTGAT CCAAGTTGAA GGTGAGCAAC CAGAGCGCAT TATCGTGGCT
TCTGAGCTGG CAAAATCGGT GATGGATCGC GCGGGCATTG AACACTTCCA TAACCTTGGT
TTCGCAACTG GTGCCGATCT TGAATTGGTA CAGTTCCAAC ATCCATTCTA CTCCTTCACT
GTGCCTGCCA TTTTAGGCGA TCACGTGACG ACCGATTCTG GTACGGGTGT GGTACATACT
GCGCCGGGTC ATGGTCAAGA AGACTTTGCC GTTGGTCAAC AGTACGGTTT GGAAGTGGCA
AACCCTGTAG GTTCAAACGG CGTATATCTG CCAGACACTG AGCTGTTTGC GGGTCAACAT
GTATTTAAAG CCAACGATTC TGTGTTGGAA GTGCTGAAAG AAAAAGGCGC GTTGTTGCAT
CATCACGCGT ATGAGCACAG CTACCCACAC TGCTGGCGTC ATAAAACGCC GATCATCTTC
CGTGCGACAC CACAATGGTT TGTCTCTATG GAACAAGCGG GTCTACGTGA ACAAGCTCTG
ACGGCAATTA AAGGCGTACA TTGGATGCCG GATTGGGGTC AAAGCCGTAT CGAAGGTATG
GTGGCAGGTC GCCCTGAGTG GTGTATCTCT CGTCAACGTA CTTGGGGCGT GCCGATTGCA
CTGTTCGTGC ACAAAGAAAC CGCCGAACTG CATCCAAACA GCGCTGATCT GATTGAGAAA
GTGGCGCAAC TGGTTGAGCA AAAAGGTATT CAAGCATGGT GGGATCTCGA TACTGCGGAA
CTGCTTGGCG CTGAAGATGC GGCCAACTAT GAAAAAGTGC TGGATACGCT AGATGTATGG
TTTGACTCAG GGGTGACTCA CTCTGCGGTT GTGGATGCAC GTCAAGAATT CAACGGCGCA
GAAGCGGATA TGTACCTAGA AGGTTCTGAC CAACACCGCG GCTGGTTCCA ATCATCCCTC
ATCTCTTCGG TGGCGATGAA AAGCAAAGCG CCTTACAAAG AAGTATTGAC GCACGGTTTC
GTGGTTGATG GCCAAGGCCG CAAGATGTCG AAATCGATCG GTAACGTGGT TGCTCCACAA
GATGTGACCA ACAAGCTGGG TGCGGATATT CTGCGTCTAT GGGTGGCGTC AACCGATTAC
ACTGGCGAAG TGGCGGTTTC AGATGAGATC CTTAAGCGTT CTGCGGATGC GTACCGTCGT
ATTCGTAACA CCGCACGTTT CTTCTTGGCG AACCTGAACG GCTTCAACCC AACCACAGAC
ATCATTCCTG TTGAAGACAT GGTGGCGTTG GATCGTTGGG CTGTCGGTCG TGCACTGGCC
GCGCAACAAG AGATCATTCA AGCGTATCAG GATTACAACC TGCACGCAGT GGTACAGCGT
TTGATGAACT TCTGCTCAAT CGAGATGGGA TCTTTCTATC TAGATGTGAT CAAAGACCGT
CAATACACAG CCAAACGTGG TGGTCATGCA CAGCGTAGCT GTCAAACCGC TCTGTTCTTC
ATTGTGGAAG CTCTGGTTCG TTGGATGGCG CCTATCATGT CATTCACCGC TGATGAAATT
TGGAACGCAA TGCCAGCACA GCAAGCTGAC GGCAGCGCAC GTGACAAGTT CGTGTTTACC
ACGGAATGGT TTGATGGCCT GTTTGGTTTG GCAGAAGGCG AAGAGCTAAA TAACGCATTC
TGGAATGATA TTCAGAAAGT GCGTGGCTCA GTCAACAAAC TGCTGGAAAA CGCTCGTAAC
GAAAAACTGA TCGGTGGTTC ACTGCAAGCA GAATTAGTGC TGTTTGCTGA TGATGCATTG
GCGAGTAAGC TAGCGAAACT GGGCGATGAG CTGCGTTTCG TGCTGCTGAC TTCAAAAGCC
GTGGTGAAAC CACTGGCTGA GAAGAGCGAG GCTGCACAGG CGACCGATAT TGATGGCTTG
TTTGTTCAAG TGAACAAAAC TGAAGCTGAG AAGTGCGATC GCTGTTGGCA CCACACCCCT
GATGTAGGCA CGATTGCAGG TCACACCACC ATTTGTGGTC GTTGCGTGTC TAACGTTGAG
GGTGAAGGCG AAGTACGCAA ATTTGCGTAA
|
|---|
| Protein sequence | MSEYKDTLNL PETGFPMRGD LAKREPEMLQ RWYQEDLYGA IRQAKKGKKS FVLHDGPPYA
NGDIHIGHAL NKILKDVIIK SKTLSGFDAP YIPGWDCHGL PIELMVEKKV GKPGQKVTAA
EFREKCREYA AGQVEGQKES FKRLGILGEW DKPYRTMDFV TEANIIRALG KIADNGHLLK
GFKPVHWCTD CGSALAEAEV EYKNKVSPSI DVRFKAADEA AVLAKFGLAA GHEGKGDVSI
VIWTTTPWTL PANRAVCLRA DLEYVLIQVE GEQPERIIVA SELAKSVMDR AGIEHFHNLG
FATGADLELV QFQHPFYSFT VPAILGDHVT TDSGTGVVHT APGHGQEDFA VGQQYGLEVA
NPVGSNGVYL PDTELFAGQH VFKANDSVLE VLKEKGALLH HHAYEHSYPH CWRHKTPIIF
RATPQWFVSM EQAGLREQAL TAIKGVHWMP DWGQSRIEGM VAGRPEWCIS RQRTWGVPIA
LFVHKETAEL HPNSADLIEK VAQLVEQKGI QAWWDLDTAE LLGAEDAANY EKVLDTLDVW
FDSGVTHSAV VDARQEFNGA EADMYLEGSD QHRGWFQSSL ISSVAMKSKA PYKEVLTHGF
VVDGQGRKMS KSIGNVVAPQ DVTNKLGADI LRLWVASTDY TGEVAVSDEI LKRSADAYRR
IRNTARFFLA NLNGFNPTTD IIPVEDMVAL DRWAVGRALA AQQEIIQAYQ DYNLHAVVQR
LMNFCSIEMG SFYLDVIKDR QYTAKRGGHA QRSCQTALFF IVEALVRWMA PIMSFTADEI
WNAMPAQQAD GSARDKFVFT TEWFDGLFGL AEGEELNNAF WNDIQKVRGS VNKLLENARN
EKLIGGSLQA ELVLFADDAL ASKLAKLGDE LRFVLLTSKA VVKPLAEKSE AAQATDIDGL
FVQVNKTEAE KCDRCWHHTP DVGTIAGHTT ICGRCVSNVE GEGEVRKFA
|
|---|
| |