| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0190 |
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| Symbol | prfC |
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| ID | 5136399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 194665 |
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| End bp | 196260 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531650 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001216153 |
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| Protein GI | 147674859 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTGATGT CAACTACACC CTATTTCGGC GAAGTATCAA AGCGCCGTAC TTTCGCGATC
ATCTCGCACC CTGACGCGGG TAAAACCACG ATTACTGAAA AAGTCCTGCT TTTCGGACGT
GCGATCCAAG TAGCCGGCAC GGTAAAAGGC CGTGGCTCAA ACCAGCATGC AAAATCTGAC
TGGATGGAAA TGGAAAAAGA GCGTGGTATT TCGGTGACCA CCTCTGTTAT GCAATTCCCG
TACGGCGATT GTCTGGTGAA CCTTTTGGAT ACTCCGGGAC ACGAAGACTT CTCGGAAGAT
ACTTATCGTA CCCTGACCGC AGTTGACTCT TGTTTGATGG TGATTGATGC GGCGAAAGGG
GTTGAAGATC GTACCCGTAA GTTGATGGAA GTGACCCGTC TGCGTGATAC GCCGATCGTG
ACCTTCATGA ACAAACTTGA CCGTGAAATC CGTGACCCGA TGGAGTTGAT GGATGAAGTG
GAAAATGAGC TGAAAATTGC TTGTTCGCCG ATCACATGGC CAATCGGTTG TGGTAAAGAG
TTTAAAGGTG TTTACCACAT TCATCGTGAT GAAACCATTT TGTACACTTC AGGCCAAGGC
CACACCATCC AAGAAGAACG CATTATCAAA GGCTTGGATA ACCCTGAGCT GGATCAAGCC
GTCGGTGCTA ATTTAGCGGC GCAGCTGCGT GAAGAGTTAG AATTGGTACT CGGCGCGTCA
CATGAGTTTG ATCGTGAGTT GTTCCTGCAA GGCGAACTGA CTCCGGTATT CTTTGGTACA
GCACTGGGTA ACTTTGGGGT TGATCATATG CTGGACGGCC TGACCCAATG GGCACCATCA
CCTATGCCTC GTCAGGCGGC TGAGCGTGTG GTTGAGGCGA GCGAAGAGAA ATTCACTGGC
TTTGTGTTTA AAATTCAAGC CAACATGGAT CCTAAACATC GCGACCGGAT TGCTTTCGTG
CGTATTGTAT CGGGCACCTA CAAGCAAGGC ATGAAGATGA ACCATGTGCG CCTTGGTAAG
CAGGTTAATA TTTCTGATGC GGTAACCTTT ATGGCGGGCG ACCGTGCACG CGCAGAAGAG
GCATTTGCTG GCGATATTAT CGGCCTGCAT AACCACGGCA CGATCCAGAT TGGCGATACT
TTTACCCAAG GTGAAACGCT GAAATTTACT GGTATTCCGA ACTTCGCGCC TGAACTGTTC
CGCCGTATTC GTCTGCGTGA CCCACTCAAG CAAAAGCAAC TGCTGAAAGG CTTAGTACAG
CTTTCGGAAG AGGGTGCGGT GCAGGTTTTC CGTCCGCTCC AAAACAACGA CCTCATCGTG
GGTGCGGTGG GGGTACTGCA GTTTGATGTG GTGGTATCGC GTCTGAAATC GGAATACAAC
GTTGAAGCCA TCTATGAAGG CGTTAACGTT GCGACCGCGC GTTGGGTTGA GTGTGACGAT
GTGAAGAAGT TTGAAGAGTT CAAACGCAAA AACCAGAGCA ACCTTGCGCT GGATGGGGGC
GATAATCTTG CGTATATCGC ACCCACCATG GTGAATTTGA ACTTGGCGCA GGAGCGTTCA
CCTGAGGTGA AATTCCGCGC GACTCGTGAA CACTAA
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| Protein sequence | MLMSTTPYFG EVSKRRTFAI ISHPDAGKTT ITEKVLLFGR AIQVAGTVKG RGSNQHAKSD
WMEMEKERGI SVTTSVMQFP YGDCLVNLLD TPGHEDFSED TYRTLTAVDS CLMVIDAAKG
VEDRTRKLME VTRLRDTPIV TFMNKLDREI RDPMELMDEV ENELKIACSP ITWPIGCGKE
FKGVYHIHRD ETILYTSGQG HTIQEERIIK GLDNPELDQA VGANLAAQLR EELELVLGAS
HEFDRELFLQ GELTPVFFGT ALGNFGVDHM LDGLTQWAPS PMPRQAAERV VEASEEKFTG
FVFKIQANMD PKHRDRIAFV RIVSGTYKQG MKMNHVRLGK QVNISDAVTF MAGDRARAEE
AFAGDIIGLH NHGTIQIGDT FTQGETLKFT GIPNFAPELF RRIRLRDPLK QKQLLKGLVQ
LSEEGAVQVF RPLQNNDLIV GAVGVLQFDV VVSRLKSEYN VEAIYEGVNV ATARWVECDD
VKKFEEFKRK NQSNLALDGG DNLAYIAPTM VNLNLAQERS PEVKFRATRE H
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