Gene VC0395_A0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0164 
Symbol 
ID5136501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp167745 
End bp168041 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content43% 
IMG OID640531624 
Producthypothetical protein 
Protein accessionYP_001216129 
Protein GI147673609 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000162983 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTAA GCAACAAACA AAAGCAGCAT CTGAAAGGCT TGGCACACAA CTTAAAACCT 
GTTGTGTTGA TGGGAGCTAA CGGACTCACA GAAGCTGTGC TGGCGGAAAT CGAAATTGCG
CTCGATCACC ATGAACTGAT TAAAGTGAAA GTCGTTTCTG AAGATCGTGA AACTAAGCAA
TTGATCGTTG ACGCAATTGT TCGCGAAACT GGTGCCGAGA AAGTACAGGT AATTGGTAAA
GTCCTAGTAC TTTATCGCCA GTCTCAGCAA CGCAAAATCG AATTGCCACG CAAATAA
 
Protein sequence
MNLSNKQKQH LKGLAHNLKP VVLMGANGLT EAVLAEIEIA LDHHELIKVK VVSEDRETKQ 
LIVDAIVRET GAEKVQVIGK VLVLYRQSQQ RKIELPRK