Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0164 |
Symbol | |
ID | 5136501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 167745 |
End bp | 168041 |
Gene Length | 297 bp |
Protein Length | 98 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640531624 |
Product | hypothetical protein |
Protein accession | YP_001216129 |
Protein GI | 147673609 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein |
TIGRFAM ID | [TIGR00253] putative RNA-binding protein, YhbY family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000000162983 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTAA GCAACAAACA AAAGCAGCAT CTGAAAGGCT TGGCACACAA CTTAAAACCT GTTGTGTTGA TGGGAGCTAA CGGACTCACA GAAGCTGTGC TGGCGGAAAT CGAAATTGCG CTCGATCACC ATGAACTGAT TAAAGTGAAA GTCGTTTCTG AAGATCGTGA AACTAAGCAA TTGATCGTTG ACGCAATTGT TCGCGAAACT GGTGCCGAGA AAGTACAGGT AATTGGTAAA GTCCTAGTAC TTTATCGCCA GTCTCAGCAA CGCAAAATCG AATTGCCACG CAAATAA
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Protein sequence | MNLSNKQKQH LKGLAHNLKP VVLMGANGLT EAVLAEIEIA LDHHELIKVK VVSEDRETKQ LIVDAIVRET GAEKVQVIGK VLVLYRQSQQ RKIELPRK
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