| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0147 |
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| Symbol | |
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| ID | 5135540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 144255 |
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| End bp | 145280 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640531607 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | YP_001216112 |
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| Protein GI | 147673375 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAC TTTGGAAACT CTTACGCGGC AACCGTATGG CGATGATTGG TGTCACCATC
TTAGGCCTGT TTTTTCTGCT CGCGGTCGCC GCACCACTTC TTACCTCTCA TGAGCCAGAC
AAGCGCACGG GTAATCCGCA CGAATACCCC GCTTTTGTCG TAAAAGCGGC TAAAGCGAAT
CCTGATGGCT GGATTGCCGA AAACCTAGCG ACAGATCGCC GCACTCTAGC GATGTCGAAA
AAAGCTGACC ACATACTAGG CACCACACGT ATGGGTCGTG ATGTGTGGTC ACAAGTGGCT
TATGGTGCTC GCGTATCCTT AGCTGTGGGC TTCGGCGCTG GTATCACGGT CTGTTTCTTA
GCCACCGTCA TCGGTGTCTC TGCGGGTTAT TTTGGCGGGA AAATCGACGA TTTCCTCACC
GCCGCAATGA ACATCATGCT GGTCATTCCG CAATACCCAC TGCTGTTCGT ATTAGCTGCC
TTTATTGGGG AAGCGGGACC TCTCACCATA GCGCTGATTA TTGGCTGTAC CTCCTGGGCT
TGGGGTGCGC GGGTGGTTCG CTCGCAAACC ATGGCACTGC GTGAGAAAGA GTTTGTGAAA
GCCGCAGAAG TACTAGGCGA ATCTTCATGG CGCATCATCT TTATTGAGAT TCTGCCAAAC
CTGATTTCGA TTGTCGGCGC AAGTTTTATC GGTTCGGTGA TGTACGCGAT CATGATGGAA
GCGACGATCT CCTTCCTAGG CTTGGGCGAT CCAAACACTA TCAGCTGGGG CATCATGCTC
TACAACGTAC AAACTTCATC TTCGATGCTG ATCGGCGCTT GGTGGGAACT GCTGGCACCT
TGTTTATCTT TGACTCTGCT GGTCACAGGC CTTGCGCTGT TGAACTTTGC GGTTGACGAA
ATTGCTAACC CACAGTTGCG TTCACATAAA GGCATGAAGC GTTGGAAAAA CCTTGCCAAG
CAAGACCAAA AAGCGCGTGA GCCAAACGTA CCACCACAAA ATGCACTTTG GAGCGGAGAT
AAATAA
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| Protein sequence | MKALWKLLRG NRMAMIGVTI LGLFFLLAVA APLLTSHEPD KRTGNPHEYP AFVVKAAKAN
PDGWIAENLA TDRRTLAMSK KADHILGTTR MGRDVWSQVA YGARVSLAVG FGAGITVCFL
ATVIGVSAGY FGGKIDDFLT AAMNIMLVIP QYPLLFVLAA FIGEAGPLTI ALIIGCTSWA
WGARVVRSQT MALREKEFVK AAEVLGESSW RIIFIEILPN LISIVGASFI GSVMYAIMME
ATISFLGLGD PNTISWGIML YNVQTSSSML IGAWWELLAP CLSLTLLVTG LALLNFAVDE
IANPQLRSHK GMKRWKNLAK QDQKAREPNV PPQNALWSGD K
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