Gene VC0395_A0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0116 
Symbol 
ID5136747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp103755 
End bp103961 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content50% 
IMG OID640531576 
Producthemagglutinin/protease regulatory protein 
Protein accessionYP_001216081 
Protein GI147675695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCAT CAATCGAAAA ACGCCCTCGA ACTCGGCTAT CGCCTCAAAA ACGCAAACTA 
CAACTGATGG AAATCGCGTT GGAAGTGTTT GCTAAACGCG GCATTGGTCG TGGTGGTCAC
GCAGATATTG CCGAGATTGC GCAAGTCTCC GTTGCAACAG TGTTCAACTA CTTCCCAACT
CGTGAAGACT TGGTTGACGT GTGCTGA
 
Protein sequence
MDASIEKRPR TRLSPQKRKL QLMEIALEVF AKRGIGRGGH ADIAEIAQVS VATVFNYFPT 
REDLVDVC