| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0102 |
|---|
| Symbol | |
|---|
| ID | 5137483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 92513 |
|---|
| End bp | 93616 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640531562 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001216067 |
|---|
| Protein GI | 147674809 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1485] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000023398 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCGA AGCAGCGATA CGAAAAAGAT TTACAACGCA CTGATTTTTA TAGTGATGAA
GCACAGGCAC GTGCCGTCGA TGCCTTAGAT AATTTGTATC ACCAATGGCT AAATTACCTC
AATCAGCCAG TGGTACGACC TTCTGTATGG CAAAAGCTCA TCGGTAAGAA GCCAACAGTG
ACGCAACCGC CACAAGGTCT CTATATGTGG GGAGGTGTCG GACGCGGTAA AACCTATCTT
ATGGATACTT TTTTTGAAGC CTTGCCGACA GAAAAGAAGC TTAGGGTTCA TTTTCATCGC
TTTATGTATC GGGTGCACGA TGAATTACGC ACTTTATCAG ACGTCAGTGA TCCGCTTGAA
ATTGTGGCTG ATCGCTTTTG TGCTGAGGCA AACATTATCT GTTTTGATGA GTTTTTCGTC
TCGGATATTA CCGATGCGAT GATCCTTGGA ACTCTGTTCG AGGCCTTATT TAGACGCGGT
ATCGTATTGG TAGCCACTTC GAATATTGCC CCCAAGGATT TGTACCGCAA TGGGTTACAG
CGAGCCCGAT TCCTACCTGC AATTGCGTTG GTGGAAATGC ATTGTCAGAT CCTAAATGTA
GATAGTGGTG TCGATTATCG TTTGAGAACC TTACAGCAAG CGGAAATTTA TCATTACCCT
TTAGACAGTA AAGCGACCGA TAACCTACAG CGTTACTTCC AGCAGTTGAT CAGCTCAGAG
CAGACTCCAG AGACGCAGAT CGACGTGAAT CACCGAATGA TTACGGTTGA AGCGGCAGGA
GACGGAGTAT TGTATGCGAC CTTTGCTCAG TTATGCCAAA CGGCACGTAG CCAAAATGAC
TATATTGAGC TGTCGAAAAT TTATCACACC GTGCTGCTGG CGGATGTCAA ACAGATGAAC
AAAAGTAGCG ATGATGCCGC GAGGCGCTTT ATTGCGCTGG TGGATGAGTT TTATGAGCGA
CATGTAAAGT TAATTATTTC TGCTGAAGTG CCCCTTACCG ATCTGTATAC CGATGGTTTG
TTAGAATTTG AATTTAAACG CTGCCAATCA CGCTTAATTG AAATGCAAAG TCATGATTAC
TTAGCGAAGG AGCACTTGGG CTGA
|
|---|
| Protein sequence | MTPKQRYEKD LQRTDFYSDE AQARAVDALD NLYHQWLNYL NQPVVRPSVW QKLIGKKPTV
TQPPQGLYMW GGVGRGKTYL MDTFFEALPT EKKLRVHFHR FMYRVHDELR TLSDVSDPLE
IVADRFCAEA NIICFDEFFV SDITDAMILG TLFEALFRRG IVLVATSNIA PKDLYRNGLQ
RARFLPAIAL VEMHCQILNV DSGVDYRLRT LQQAEIYHYP LDSKATDNLQ RYFQQLISSE
QTPETQIDVN HRMITVEAAG DGVLYATFAQ LCQTARSQND YIELSKIYHT VLLADVKQMN
KSSDDAARRF IALVDEFYER HVKLIISAEV PLTDLYTDGL LEFEFKRCQS RLIEMQSHDY
LAKEHLG
|
|---|
| |