Gene VC0395_A0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0065 
SymbolcysP 
ID5136905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp60744 
End bp61745 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content49% 
IMG OID640531525 
Productthiosulfate ABC transporter, periplasmic thiosulfate-binding protein 
Protein accessionYP_001216038 
Protein GI147673555 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4150] ABC-type sulfate transport system, periplasmic component 
TIGRFAM ID[TIGR00971] sulfate/thiosulfate-binding protein 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGAA TTAAATCGAC ATTAACAGCG TTACTGCTAG CAGGCTCGTT CCAAGCCTCT 
GCGGCCGATC AAACCATTCT CAACTCATCT TATGATATTG CTCGTGAGCT GTTTGTGGCT
TACAACCCTG TGTTTGCTGA GCATTGGCAA CAAAAAACAG GGAAGACGGT CGAAATTAAA
CAGTCGCACG CTGGATCATC GGCTCAAGCG CGTTCTATTC TGCAAGGCCT AGCGGCAGAT
GTGGTGACGT TTAACCAAGT GACCGATGTG CAAATTCTGC ACGACAAAGG CAAGCTGATC
TCAGCAAACT GGCAAACCCT GCTACCAAAC GCAAGCTCGC CTTATTACTC CACCACCGCA
TTTTTGGTGC GCAAAGGCAA CCCAAAGAAC ATCCAAGATT GGAGTGATTT GGTACGTGAT
GATGTGAAAA GTGTGTTCCC GAACCCGAAA ACCTCAGGTA ATGCGCGTTA CACCTACTTG
GCAGCGCTAG GCTTTGCACA AAAACAATTT GGTCAGGATA ACCAAGTGCA GCAAGATGAG
TTTTTGAAGA AGTTTCTGGC TAACGTCGCG GTATTTGATA CTGGCGGTCG TGGTGCAACC
ACATCATTCG TTGAGCGTGG GATTGGCGAT GTGCTGATCA CCTTTGAATC GGAAGTGAAT
AACATTCGTC AGCAATACGG TGCGGATGAT TACCAAGTGG TGGTGCCGAA AACCTCGATT
TTGGCTGAAT TCCCTGTCGC GGTAGTGGAG AAAGTGGCAA AACGTAATGG GACTTATGAT
GTGGCGACCG AATACGTTTC ATACCTGTAC AGTGAGCCAG CACAGCGTTT GCTTGCAGAA
TTTAACTACC GTGTGCACGA TGCCAAAGTA CAAGCTGAGT TTGCTGAGCG TTTTCCCGCC
GTTGAATTGC TGACTGTGGA AGGGATCGCC GGTGGCTGGG AGCAAGCGAT GAAAACCCAG
TTCGCCAATG GGGCTAAATT GGATCAACTG CTGCGCCGCT AA
 
Protein sequence
MNRIKSTLTA LLLAGSFQAS AADQTILNSS YDIARELFVA YNPVFAEHWQ QKTGKTVEIK 
QSHAGSSAQA RSILQGLAAD VVTFNQVTDV QILHDKGKLI SANWQTLLPN ASSPYYSTTA
FLVRKGNPKN IQDWSDLVRD DVKSVFPNPK TSGNARYTYL AALGFAQKQF GQDNQVQQDE
FLKKFLANVA VFDTGGRGAT TSFVERGIGD VLITFESEVN NIRQQYGADD YQVVVPKTSI
LAEFPVAVVE KVAKRNGTYD VATEYVSYLY SEPAQRLLAE FNYRVHDAKV QAEFAERFPA
VELLTVEGIA GGWEQAMKTQ FANGAKLDQL LRR