| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1123 |
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| Symbol | |
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| ID | 5134949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 1088346 |
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| End bp | 1089842 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531445 |
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| Product | putative NADH dehydrogenase |
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| Protein accession | YP_001215959 |
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| Protein GI | 147672089 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0103051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGA TTGGGTTGAC CTTACCCGTT GTGATCTCAC TGCTCACCGC AGTTGCGATC
TTTTTAGCGG GGCGTAATCG TTGGCTGACC AACGGTTTGA GTGTGATCTG CAGTGTCATC
AATCTCTTTA CTGGCGCTCT ACTCACGATC ACCATTTACA CTCATGGCCC AGCATCTATT
GCCTTTGGGC AATGGCCAGC CCCCTTTGGC ATCGTTTTTG TCGCTGATTT ATTGAGCGTC
GGTATGGTCA TGGTGACGGC CATTATTGGT TTGGTTAGCG TTATCTATGC GATTGCCGAT
TTAAGCGCCA AACTCTCATA CGCGCGCTAC CACGCACTGT TGCATGTTCT ACTGGCTGGT
GTGTATGGCG CTTTCTTAAC GGGGGATATT TTCAACCTTT ATGTCTGGTT TGAAGTCATG
CTGATCGCTT CTTTCGGCTT GATGGTGTTG GATGCAAACC AGCAGCAAAT CGATGGCGCC
ATCAAATATG TGCTGCTCAA TCTTATCTCT ACCTTGGTGT TTTTACTTTC GATAGGACTG
CTTTACGGTG CCACAGGAAC CTTAAACCTC GCAGATTTAC ATGACAAAGC TCAATCCCTC
GCTCCTGAGA TGAAAACCAT GCTCGCTGGA TTGCTATTGT TCGCGTTTTC TATCAAAGCA
GCGCTGTTTC CTCTGTTTGC TTGGCTACCG GCGTCTTATC ACACCTTGCC GAGCGCCATT
GTTGCCCTGT TTGCTGCTTT ACTCACCAAA GTCGGTGTCT ACGCTTTGCT GCGGGTCTTC
ACTCTGGTGT TTCCGCTCGA TGGCAGTGGT TGGCAACCGG TTCTACTGGG GATTGCGGCG
CTGACCATGC TCACTGGCGT ACTCGGTGCA GCAAGCCAAT ATGACATTAA AAAAATCCTT
TCTTTTCATA TCATTAGCCA AATTGGCTAC ATGATTATGG GACTGGCCAT TTATACTCCT
TTGGCCATCA CAGGGGCGAT TTTTTATGTT ATTCACCATA TCTTAGTAAA GGGGAACCTA
TTTCTGATTG GTGGCCTGAT TGGCAGAAAG TACGGCACTA CACAATTGAC GCAGCTCGGC
GGAGTCTATC GCGCCATGCC CTGGCTTACC TTTGGCTTCT TACTCGCCGC CTTCTCTTTG
GCGGGCTTCC CTCCTCTGTC GGGGTTTTGG GGCAAGTTTC TAGTCATCAA AGCGAGTTTG
GCTGCTGAGC TGTATTGGCT TGCCGCAATT GCGCTATTGG TTGGCCTGCT AACGATTTTC
TCGATGACCA AAATTTGGAA TGAAGTGTTT TGGAAAGATG CTCCTGCCGC TCTACCGCAG
GAGACGTTAG CCCGCTCAAC ACTCGGTCTT TATGCACTGC CGATCCTCGT GCTCACTCTG
TTTAGCCTAG TGATTGGTTT GGCTGCGCAG CCGTTTTACC AATTTGCAAC CTTAGCGGCA
GAACAATTAT TAACGCCAAC CGCTTATATC CATGCTGTTT TGGGAGGCTC AAAATGA
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| Protein sequence | MTAIGLTLPV VISLLTAVAI FLAGRNRWLT NGLSVICSVI NLFTGALLTI TIYTHGPASI
AFGQWPAPFG IVFVADLLSV GMVMVTAIIG LVSVIYAIAD LSAKLSYARY HALLHVLLAG
VYGAFLTGDI FNLYVWFEVM LIASFGLMVL DANQQQIDGA IKYVLLNLIS TLVFLLSIGL
LYGATGTLNL ADLHDKAQSL APEMKTMLAG LLLFAFSIKA ALFPLFAWLP ASYHTLPSAI
VALFAALLTK VGVYALLRVF TLVFPLDGSG WQPVLLGIAA LTMLTGVLGA ASQYDIKKIL
SFHIISQIGY MIMGLAIYTP LAITGAIFYV IHHILVKGNL FLIGGLIGRK YGTTQLTQLG
GVYRAMPWLT FGFLLAAFSL AGFPPLSGFW GKFLVIKASL AAELYWLAAI ALLVGLLTIF
SMTKIWNEVF WKDAPAALPQ ETLARSTLGL YALPILVLTL FSLVIGLAAQ PFYQFATLAA
EQLLTPTAYI HAVLGGSK
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