Gene VC0395_1074 details

Gene Information

• Locus tag: VC0395_1074
• ID: 5134468
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: -
• Start bp: 1042561
• End bp: 1043100
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640531396
• Product: phage regulatory protein CII (CP76)
• Protein accession: YP_001215910
• Protein GI: 147672159

Plasmid Coverage information

• Num covering plasmid clones: 66
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTTCTG ACATCGCCAT GTATGAATTA CGTGAACGCA AACAGCAAGC TTACAACGCC 
GTTTGCAGTG ATTTCGTTGT CAATCACAAC ATTGAACAGC TCGCCAAACG CATTTCGTTA 
GACGGGCAAT CGCTGCGCAA CATGCTCAAC CCTGCACAGC CGCACAAACT GAGCCCAGTT 
GATTTAGTGC TGCTGTGCAA GGCATCAGGG GATTACACCA TCATCAATAC CCTTTTCAGT 
GATTGCGGCG TAGTTGCCGT GGCGCTGCCA GAGCAAGGGG AAGAAAAGAA CATCATTGAG 
CGCGTACTGC TCAACACCTC GCTTTGTGGG GAACTCTCTA GTGATGCAAT GCAAATGTGC 
ACCGCAGAGC GTTTACCGCG CAGCCGTAAG CGCAAAACCC TCGCGAAGTG CCAAGCCGCC 
TTGGGCAACT TGGCATTACT GATCGCCGAT TTAGAAAAAC GCACAACAGG CCTGCAACCC 
TTGATACAAA TGGGTTCGGA TTTCATGGCT CAAGGTGCGC CAATCCCCGG ATTCGCATAA 

 

Protein sequence

MVSDIAMYEL RERKQQAYNA VCSDFVVNHN IEQLAKRISL DGQSLRNMLN PAQPHKLSPV 
DLVLLCKASG DYTIINTLFS DCGVVAVALP EQGEEKNIIE RVLLNTSLCG ELSSDAMQMC 
TAERLPRSRK RKTLAKCQAA LGNLALLIAD LEKRTTGLQP LIQMGSDFMA QGAPIPGFA