Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_1064 |
Symbol | |
ID | 5134164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 1035797 |
End bp | 1036135 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640531386 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001215900 |
Protein GI | 147672398 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA CGATTCACGA TATTGATCCC ATCATGCAGT TTTTCACGCA GGAGCGTTTG CGTAAGCGCT TAACTCAGCA GCAGGTTGCC GAGCGTGCTG GCGTTTCGCT GCGTATGTTG CAGCGGTTAG AACAGGGTGA ACGAGTGGTG GATATTGCCC AGATTCGGCG TTTAAGTACG GCGCTTGAGA TTTCAGTTGG GCATATGATC ATGCACGGGG CGGTGAGTTC GCCAGAAGGC AAGCAGGTGG ATTCTCTCCC CGCGCCGATT CGTGATTGTT TGATTGAGTT GATTAAGTCG ATTAATGATG AAATTGCGGC GCAAAGCCGC AGCGCATAG
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Protein sequence | MAKTIHDIDP IMQFFTQERL RKRLTQQQVA ERAGVSLRML QRLEQGERVV DIAQIRRLST ALEISVGHMI MHGAVSSPEG KQVDSLPAPI RDCLIELIKS INDEIAAQSR SA
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