| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1056 |
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| Symbol | |
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| ID | 5134270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 1029269 |
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| End bp | 1030168 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531378 |
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| Product | phage capsid scaffolding protein (GPO) |
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| Protein accession | YP_001215892 |
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| Protein GI | 147671699 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAA CCAGTGATTG GGTAATAGTC GCCACAGCAG GAACAACAGT TTCTGATGGA
AGAGTCATCA GCGAAAGCTG GATTAATGAC ATGGCAGAAC TGTATGACCC AGAAGAGTAC
AAAGCTCTAA TCTGGCCTGA GCATTATCGA AGTGCTTGGG CGGTATTTGA GGGTAAAAAC
TGGGGTGAAG TTGAAGAGCT AAAAGCAGGA AAGTTCAAAG ACAAACTGCG ACTTTTTGCC
AAGTTAACGC CAAATCATTA TCTGCTTGAA GCCAATAAAG ACGGTCAAAA GCTCTTCTCA
TCAATCGAAC CAGAACCGGA TTACAAAAAA GAAGGACGTT GTTACTTGCT TGGCCTAGCT
GTGACTGACT CCCCAGCATC ATCGGGTACA ACTCGCCTTC GCTTTTCTCG CGTTCAAGGT
CAATACACGG AATTGGAGTG TAGCGCGTTG GAAGAATGGG ACTTGACGCC GTTCTACAGC
CAAAACGCTG AATTCTCGAA ATTCTTTGCC ATGTGCAGAA GCTTCTTTAA TCGTGAACAG
CCAAACGAAA CCAACCAACC TCAATCAGAG GACGAAGAAC CCATGAAGCA AGAACAGTTC
GACCAAATGA TGGGCGCTAT TAACGGTATT GCGACTAAGC AAAACGAGCT TGAAAGCAAG
TTCAATACCT TCTCCGCCCA AAAGCCAGAA ACCAAAGGTG AAGAACCCGA AGGTGATGGC
AAGGACAAGG AAACGAACGG CATGACTCCT GAGCAGTTCA GCAAGCTCAC AGAAACGCTT
GATAGCATCG CTCAAAAGCA AGCCGATCTC GAAACCAAAT TCACGCAACT GAGCCAAACG
GGTCCCGAAG GCCAAGGCGC AGATAAATCA GGTGGCGGCG AAGGCTACAT GCCTGTTTAA
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| Protein sequence | MPKTSDWVIV ATAGTTVSDG RVISESWIND MAELYDPEEY KALIWPEHYR SAWAVFEGKN
WGEVEELKAG KFKDKLRLFA KLTPNHYLLE ANKDGQKLFS SIEPEPDYKK EGRCYLLGLA
VTDSPASSGT TRLRFSRVQG QYTELECSAL EEWDLTPFYS QNAEFSKFFA MCRSFFNREQ
PNETNQPQSE DEEPMKQEQF DQMMGAINGI ATKQNELESK FNTFSAQKPE TKGEEPEGDG
KDKETNGMTP EQFSKLTETL DSIAQKQADL ETKFTQLSQT GPEGQGADKS GGGEGYMPV
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