Gene VC0395_1038 details

Gene Information

• Locus tag: VC0395_1038
• ID: 5134094
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: -
• Start bp: 1018206
• End bp: 1018865
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640531360
• Product: hypothetical protein
• Protein accession: YP_001215874
• Protein GI: 147672259

Plasmid Coverage information

• Num covering plasmid clones: 57
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAAT GGGATAAACA AGCACCAGAG CTAGAACAAA CGCCAACGCC GTGGTGGCAG 
GATGGCGAAA CCACCTCAGA AGAGAAGATA GAACCCTATT TTCTGAGCAA TGGTGTGTTT 
GCATTCATGC GCAAAGTGCG CGGCTGGTTG CTGTTCCCGC TTCAACAGTT TGACGCGCTC 
ACCTGCAGTG AAAAAATTCT GCGCCTGATG GCGTGGGATA GAGACATCAA ACAATTCAAC 
GGTGAGCCGT TGTGGCTGTT TCGCAAGCGG GTGAAGTTTG CCACCGTTAA CGCAAAAGAC 
GCAGGCAGCG TAGCAGGGTT TAAACGCATC TTTGAACGCT TGGGCATTGC CATTGTGTCA 
TTCAAAGAAC GCGAAAGCGC CGTAGAGTGG GATGTTTGCA CGATTGAACT GACGGACAGT 
TCACTCTCAC AAAACAGCCG TTTAGTACAA ACGCTGATCG AACAATACGG CAGAACCTGC 
CGCCGCTATC GCTTTCAAGT GACCTATCCA AGCGAAATGA ACATTTATCA CGGCGAGTTC 
AGCCATAGCT TTGCACTCTA TCACGCCAAA TCGGAAGAAG TGACCCACAT CGAATTCAAG 
CCTCAGCCGA TTGAGCACCA TCAACAAATC TTTATCGCCA CCTTAGGGGG TAACTCATGA 

 

Protein sequence

MSEWDKQAPE LEQTPTPWWQ DGETTSEEKI EPYFLSNGVF AFMRKVRGWL LFPLQQFDAL 
TCSEKILRLM AWDRDIKQFN GEPLWLFRKR VKFATVNAKD AGSVAGFKRI FERLGIAIVS 
FKERESAVEW DVCTIELTDS SLSQNSRLVQ TLIEQYGRTC RRYRFQVTYP SEMNIYHGEF 
SHSFALYHAK SEEVTHIEFK PQPIEHHQQI FIATLGGNS