Gene VC0395_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0987 
SymbolulaD 
ID5134037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand+ 
Start bp962923 
End bp963570 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content52% 
IMG OID640531309 
Product3-keto-L-gulonate-6-phosphate decarboxylase 
Protein accessionYP_001215823 
Protein GI147671901 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0269] 3-hexulose-6-phosphate synthase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.304875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAC CAATGATTCA AATCGCCCTC GACCAAACCA ACCTAACCGA TGCCGTGGCC 
GTAGCGAGTA ATGTCGCCAG TTACGTCGAT GTGATTGAAG TTGGCACCAT TTTGGCTTTC 
GCGGAAGGAA TGAAAGCGGT GTCGACTCTG CGCCACAACC ATCCGAATCA TATTCTGGTG 
TGTGACATGA AAACCACCGA TGGCGGAGCC ATTCTCTCGC GTATGGCATT TGAAGCGGGG 
GCGGATTGGA TCACCGTGTC GGCTGCCGCA CACATCGCGA CCATTGCCGC GTGTAAAAAA 
GTGGCGGATG AGTTAAATGG CGAAATTCAA ATCGAGATTT ATGGCAACTG GACAATGCAA 
GATGCTAAAG CATGGGTCGA TTTAGGCATC ACTCAAGCCA TTTACCACCG CTCACGCGAT 
GCGGAATTGG CCGGTATTGG TTGGACAACG GACGATCTCG ACAAAATGCG CCAGCTCTCT 
GCGCTAGGCA TTGAGCTTTC GATCACCGGC GGCATCGTAC CAGAAGATAT TTACCTGTTT 
GAAGGGATCA AAACCAAAAC CTTTATTGCC GGACGTGCAT TAGCAGGCGC CGAAGGCCAA 
CAAACCGCGG CGGCTCTGCG TGAGCAAATC GACCGTTTCT GGCCATAA
 
Protein sequence
MTKPMIQIAL DQTNLTDAVA VASNVASYVD VIEVGTILAF AEGMKAVSTL RHNHPNHILV 
CDMKTTDGGA ILSRMAFEAG ADWITVSAAA HIATIAACKK VADELNGEIQ IEIYGNWTMQ 
DAKAWVDLGI TQAIYHRSRD AELAGIGWTT DDLDKMRQLS ALGIELSITG GIVPEDIYLF 
EGIKTKTFIA GRALAGAEGQ QTAAALREQI DRFWP