Gene VC0395_0981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0981 
Symbol 
ID5134208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp956710 
End bp957777 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content48% 
IMG OID640531303 
Productputative L-ascorbate 6-phosphate lactonase 
Protein accessionYP_001215817 
Protein GI147671571 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAG TGAATGAAAT CACTCGCGAA TCCTGGATTT TGAGTACGTT CCCTGAGTGG 
GGAACTTGGC TAAATGAAGA GATTGAACAA ACGGTTGTGG AGCCAAATAC TTTTTCGATG
TGGTGGCTAG GCTGTACGGG GATTTGGCTA AAGAGTGCTG GCAACACCAA CCTTTCCATC
GACTTTTGGT GCGGAACCGG TAAAAAAACG CAGAAAAACC GCTTGATGAA TACCCAGCAT
CAGATGATGC GTATGGGCGG TGTGGAAGCG TTGCAACCGA ACTTGCGAAC CTCGATTTTC
CCACTCGATC CGTTTGCGAT TAAAGAGATT GATGCGGTGC TGGCTTCACA CGATCACGCT
GACCACATTG ACGTTAACGT TGCTGCAGCG GTGCTGCAAA ACTGCGGCGA GCACGTAAAA
TTCATTGGCC CACAAGCCTG TGTTGATTTA TGGCTAGGAT GGGGTGTACC GCAGGAGCGC
TGCATTGTGG CAAAAGTCGG TGATGTGCTT GAAATCGGCG ATGTTAAGAT TCGCGTGTTG
GATTCGTTCG ATCGCACCGC GTTAGTGACC TTGCCCAAAG GCGTATCGTC TTACGACAAA
GCGATTTTGG ATGGTATGGA TGAGCGAGCC GTCAACTACT TGATTGAAAC CTCGGGTGGC
TCTGTGTACC ACTCCGGTGA TTCACACTAC TCAAACTACT ATGCGAAACA CGGTAACGAT
TACCAGATTG ATGTGGCGTT GCTGTCGTAC GGTGAGAACC CACGCGGAGT GACCGATAAA
ATGACCTCTT CGGATGTATT GCGCGCTGCA GAATCGCTCG ATTGCCAAGT TGTCGTGCCA
TTCCACCACG ATATCTGGGC GAACTTCCAA AATGATCCGC GTGAAATCGA AGTGCTGTGG
AATATGAAAA AAGATCGCTT ACAGTACCAA TTTGCGCCGT TCTTCTGGCA AGTTGGCGGT
AAATACACCT ACCCAACTGA TAAAGGACGC ATGCATTACC AGCATTTCCG TGGCTTCCAA
GATATCTTCA AAAATGAGCC AGAACTGCCT TATAAAGCCT TTTTGTAA
 
Protein sequence
MSKVNEITRE SWILSTFPEW GTWLNEEIEQ TVVEPNTFSM WWLGCTGIWL KSAGNTNLSI 
DFWCGTGKKT QKNRLMNTQH QMMRMGGVEA LQPNLRTSIF PLDPFAIKEI DAVLASHDHA
DHIDVNVAAA VLQNCGEHVK FIGPQACVDL WLGWGVPQER CIVAKVGDVL EIGDVKIRVL
DSFDRTALVT LPKGVSSYDK AILDGMDERA VNYLIETSGG SVYHSGDSHY SNYYAKHGND
YQIDVALLSY GENPRGVTDK MTSSDVLRAA ESLDCQVVVP FHHDIWANFQ NDPREIEVLW
NMKKDRLQYQ FAPFFWQVGG KYTYPTDKGR MHYQHFRGFQ DIFKNEPELP YKAFL