| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0961 |
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| Symbol | |
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| ID | 5134727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 937451 |
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| End bp | 939124 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531283 |
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| Product | decarboxylase, group II |
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| Protein accession | YP_001215797 |
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| Protein GI | 147672154 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000000836659 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCATG TGTTATCTGA TCGCTGGTTG GCGCTGTCTG CCAACCAGCT CAATCCGCGT
TTCGAGCAAC ATTACTTCGC CGTAAAAGCG AAGTTTTTTT CCCGCGATCC GGCATTGTGG
CCGCTGTATC GTTCGTTGGA AATCCAACCG CTTTTACAGT CGCGTCGAGA GTCACCCGTT
TACGATCATC ATCTGTTTAA ACAACTGACT ACTCGAGAGG AAGTGCCCCC TTTTTCACGT
TACCAAGGCA AGCCATTTGA TGAAGTGGCT CTTTATGCCG CTCAGCATTC GAAAAATTGG
GACGATCCTC GCTCGGTCGA GAATGTGATT TCAACCCCGA GTGATCCCGC TATTCACGGC
GCATTACTGG CGATGATTGC CAATCCCAAT TTGGTGTACG GCGAATATTC GGGTATGGCG
GCAGAGTTAG AAAAGTTGGT GGTACGGCAA ATTGCTTCAC TGGCGGGCTA TTCTACCGAG
CAGGCGACTG GAATTTTTAC CCAAGGGGGG ACGTTTTGTA ATTTATACGG ATACCTGCTT
GGGCTGCGCA AAGCATTACC CAGTTCCATT TCTCAAGGTA TCTCGACAGG TTCCTTGCGG
ATGCTGAATT CGGAGGCAGG ACACTACTCG AACATGACAA ACTTGGCGCT GCTCGGGATC
AGTGTGCAAT CACAGGTGAT CCGTGTCCGA GTCAATGACA ATAACGAAAT TGACTTGATT
GATCTGCATC GCCAACTCAG TCGCTGCTTT GAGCAGGAGC AAGTTGTGCC AACCATCATG
CTCACGTTTG GTACGACCGA TACGTTTGCG CTGGATGATA TCAAAGCGGT GTATGACATC
CGTGAATCGC TCTGCCATCA ATACGGAGTG CGTCGTAAAC CGCATATCCA TGTTGATGCA
GCGGTAGGGT GGAGTTTGCT GTTTTTCGCA AGTTACGATT TACAGCGTAA CCCGTTGGCG
ATTAATGCTG CGACCTTATC GGCCATCACC GAATGGCTAC CTAAAATTCG TGCGCTGCAG
TGGGCGGATT CATTTACCGT GGATTTCCAG AAATGGGGTT ATGTACCCTA CACCTCCAGT
TTGGTGATGA TAAAAAATAG GCATGATTTA CAGGCACTCA AATCTGATCC CAGTTATTTC
TCCTATTTTG AAACTGCGCG GCAACAAGAA ACGCATTTAC AAGCCACGAT AGAATGCTCA
CGCAGTGCAG TTGGGGTGTT TGCCGCCTAT TCAGCATTGC AAATGATGGG GATTGATGGC
TATCAAACCA TCCTCGCGCA TGGCTTACAA AATGCCAGTT ATCTGCGTGC GCAGTTGGCG
ACACTGGCGC ACTGCAAACT GATTGCAGAA CAAAATCATG GTCCGAGCGT GGCATTTCGT
CTCTACCCCC CGAGTGTAAA ATCGGCTCAT GACGCGTTCG CTCTAGAGAT GGATCTCTGC
CAACATCCAG ATTATGTCGA GAAGATGGTG ACTCACACTC TGTATCATCG TAGCCACTTT
CTTGCGCGTA AGGGGCAAAC CTTAAACAGT AACTGGGTTG AATCACTAAC GCGTACCCAT
TACGACCCTG AGGGACACTG CTTGCATTTG CCGGGAGAAA AAGTGGTATT GATGAACCCG
CATACCATGC GCACTCATTT GGATGCTTTC ATTGCAGAAA TGAGCCTCAG ATAG
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| Protein sequence | MSHVLSDRWL ALSANQLNPR FEQHYFAVKA KFFSRDPALW PLYRSLEIQP LLQSRRESPV
YDHHLFKQLT TREEVPPFSR YQGKPFDEVA LYAAQHSKNW DDPRSVENVI STPSDPAIHG
ALLAMIANPN LVYGEYSGMA AELEKLVVRQ IASLAGYSTE QATGIFTQGG TFCNLYGYLL
GLRKALPSSI SQGISTGSLR MLNSEAGHYS NMTNLALLGI SVQSQVIRVR VNDNNEIDLI
DLHRQLSRCF EQEQVVPTIM LTFGTTDTFA LDDIKAVYDI RESLCHQYGV RRKPHIHVDA
AVGWSLLFFA SYDLQRNPLA INAATLSAIT EWLPKIRALQ WADSFTVDFQ KWGYVPYTSS
LVMIKNRHDL QALKSDPSYF SYFETARQQE THLQATIECS RSAVGVFAAY SALQMMGIDG
YQTILAHGLQ NASYLRAQLA TLAHCKLIAE QNHGPSVAFR LYPPSVKSAH DAFALEMDLC
QHPDYVEKMV THTLYHRSHF LARKGQTLNS NWVESLTRTH YDPEGHCLHL PGEKVVLMNP
HTMRTHLDAF IAEMSLR
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