Gene VC0395_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0930 
Symbol 
ID5134371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp910278 
End bp910631 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content38% 
IMG OID640531252 
Productputative killer protein 
Protein accessionYP_001215766 
Protein GI147672492 
COG category[R] General function prediction only 
COG ID[COG3549] Plasmid maintenance system killer protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGCACAG TGTCATTATG CGTTAGTCTT TGCCTATGGA TGCACAATGA GACAGTGCAA 
GTTGCAATGG CATTAGAATT TAAAGATAAG TGGTTAGAGC AGTTTTACGA GGATGATAAA
CGACATCGTT TAATTCCAAG TAGCATAGAG AATGCTCTAT TTCGGAAGCT GGAAATCTTA
GATGCAGCTC AAGCTGAATC AGACTTAAGA ATTCCACCGG GTAATCGTTT TGAACATCTT
GAAGGAAATC TTAAAGGTTG GTGTTCAATT CGAGTGAACA AACAGTATCG TTTGATTTTT
CAGTGGGTTG ATGGTGTTGC ACTAAATACT TACTTAGACC CACATAAGTA TTGA
 
Protein sequence
MCTVSLCVSL CLWMHNETVQ VAMALEFKDK WLEQFYEDDK RHRLIPSSIE NALFRKLEIL 
DAAQAESDLR IPPGNRFEHL EGNLKGWCSI RVNKQYRLIF QWVDGVALNT YLDPHKY