Gene VC0395_0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0906 
Symbol 
ID5135004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand- 
Start bp897959 
End bp898525 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content42% 
IMG OID640531228 
Producthypothetical protein 
Protein accessionYP_001215742 
Protein GI147671642 
COG category[S] Function unknown 
COG ID[COG2320] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCCGCG GTGGTTTCGG TGGTTTGTGT TTGGGTTTGG TTGTTATGCG TTGTCAGCCC 
CTTAGGCGGG CGTTATGCCT TTTGGGAGAC AATATGCAGT TTTACAAAGC AGATGAATAT 
CAGGCATCTT GTGAAAACCT GTATCGTAAG TACGAACTTG AGATAGCTGC TTTACTTCCA 
GATGCATCTA TTGAGCATAT TGGAACTTCC TCTATTCCTA ATGCTGTATC TAAAGGTGAC 
CTAGACATAC TTGTTGGTGT TAACGGCAAG GAACTAGAAA ATGCAGTAAA GTTACTTTCT 
ACTCTAGGTT TCAACGAAAA ATCCGATACG TTAAGAACTC CGGAGCTTTG CATGCTGGAA 
AATAGCTCAG GTGAGGATGT CGCTTTTCAA GTTGTAGCTA ATGGTTCGGA ATTTGAGTTT 
TTTGTGGGGT TTAGAGACAA ACTCCGTAAA AATCCTGAGT TAGTTCAACG ATACAATGAG 
CTGAAAATAT CTTGTACAGG TTGGTCTCAC GAAGAGTATC GTCGGAAAAA ATCAGCTTTT 
ATTGAGCGCG TGTTAGGGCA GGCATAA
 
Protein sequence
MSRGGFGGLC LGLVVMRCQP LRRALCLLGD NMQFYKADEY QASCENLYRK YELEIAALLP 
DASIEHIGTS SIPNAVSKGD LDILVGVNGK ELENAVKLLS TLGFNEKSDT LRTPELCMLE 
NSSGEDVAFQ VVANGSEFEF FVGFRDKLRK NPELVQRYNE LKISCTGWSH EEYRRKKSAF 
IERVLGQA