Gene VC0395_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0856 
Symbol 
ID5133928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp871207 
End bp871899 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content34% 
IMG OID640531178 
Producthypothetical protein 
Protein accessionYP_001215692 
Protein GI147672182 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAT ATGAGAATGT AGTTATTGGA AACTTTCTTT ATGGATTAGG CTACTCTATT 
GGTACTAAGA AAGGCGGAAA TGAGGTTCTG TCAGTCGTAA ACCTGCTTCA ACAAACGCCA
GCAGACAAAG AGTTGGGCGA TGTACTTTTA GAATTTCCTG GAGTTGTAAA ACTCATAGAG
TTTAAAAACA AAGCTGGCAG CTTAAAAAAA GAGATGCAAA GACACTCTCA ATTAAAGTCG
GCATTGGGAG AAGACCATGC AAATATTTCT TTGTCTAAGA GTATTCACTG GTATGTTGAA
ACCGAGCCTT TTAATGATCT TTGTATAAAT AATATCAAAC CTTATTTGGA TGCTTTTGAT
AGTAGTGTTA ACGATAGTTT TACATTAGAA ACTTTTATTG AGAAAATTGT AGACGATGTA
TTTAGTAACG ATACCAATTT TAGCGATGAT GACTTTAAGG ACTATTTGAG TTTGGTTGCT
AGGTGCCAAG GTACAGGAGA GGTAGGAACT GGAGGTATAA TCATCGCAGT TTCTGAGAGT
AGAATTAAGT ATTTCCAGTT TACGGATATT ATGCAGCTCA GGTTACAACA TGAAGAATAT
GTGAATGAGA TAAAGAATCA ATTTAATAAA AGTATAGAGG CTAAAAAAAG TCTTAATAGA
ACCAAAGGTT TCGATATGGA GATAAGTCGA TAA
 
Protein sequence
MKLYENVVIG NFLYGLGYSI GTKKGGNEVL SVVNLLQQTP ADKELGDVLL EFPGVVKLIE 
FKNKAGSLKK EMQRHSQLKS ALGEDHANIS LSKSIHWYVE TEPFNDLCIN NIKPYLDAFD
SSVNDSFTLE TFIEKIVDDV FSNDTNFSDD DFKDYLSLVA RCQGTGEVGT GGIIIAVSES
RIKYFQFTDI MQLRLQHEEY VNEIKNQFNK SIEAKKSLNR TKGFDMEISR