Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0840 |
Symbol | |
ID | 5134415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 863244 |
End bp | 863669 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640531162 |
Product | putative lipoprotein |
Protein accession | YP_001215676 |
Protein GI | 147672228 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAGTG GATTGAACAA GGACAGTTTT ATGAAATGGT TTTTAGCTTT TTGGCTCGTT CTCACAAGCT GTTTTTCGGT TAGCTTGTAT GCCAATGACG CCGTTTTACA ACAAGCTTAT CAATCGCAGC AAAGTGACTT GCAAGTTCAA GGACTTGGAC AAGTAGTAAA AGTGTTGCCC GACGACAATG ATGGTTCGAG GCATCAAAAA TTCATCTTAA AGCTCAATAG CGGACAAACA TTGCTGGTTG CACATAACAT CGACTTAGCA CCAAGAATTC CGAACTTGAA AGTTGGCGAT AGTGTTGAGT TTTATGGTGA ATACGAATGG AACAAAAAGG GTGGGGTTCT TCACTGGACT CATAAAGATC CTCAAAATCG TCATGCTCAT GGTTGGTTGA AACACAATGA TCAGGTGTAC GAGTAA
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Protein sequence | MVSGLNKDSF MKWFLAFWLV LTSCFSVSLY ANDAVLQQAY QSQQSDLQVQ GLGQVVKVLP DDNDGSRHQK FILKLNSGQT LLVAHNIDLA PRIPNLKVGD SVEFYGEYEW NKKGGVLHWT HKDPQNRHAH GWLKHNDQVY E
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