Gene VC0395_0725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0725 
Symbol 
ID5134280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp785945 
End bp787153 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content48% 
IMG OID640531047 
Producttrans-2-enoyl-CoA reductase 
Protein accessionYP_001215561 
Protein GI147672213 
COG category[S] Function unknown 
COG ID[COG3007] Uncharacterized paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000102054 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATCA AGCCAATCAT TCAGGGCGTT GTGGCGCGCA GCGCCCATCC TTATGGCTGC 
GAACAAGCCG TCCTACAACA GATCCAGTAC GTAAAACAGG CGAATCCGAT CAAGTCAGGT
CCAAAACGCG TTCTGATCCT CGGAGCATCG TCGGGATTTG GGCTCGCGGC AAGGATTGCG
CTGACCTTTG GTGGCGCGCA AGCCGATACG ATTGGGGTCT CCTTTGAACG TGCTCCGAGT
GAAACACAAA CCGGCAGTGC AGGTTACTAC AACAATCTCT TTTTTAAACA GCATGCCGAG
CAAGCAGGTC GCATCGCGGT CAATCTCGAA GGCGATGTTT TTTCTGTCGA CATGCGTGAG
CAAGTGATTG AAGCGATAGA AACCTATTTT GAAGGGGAAG TGGATCTCAT CATTTACAGC
ATTGCCAGTG GCATGCGCCG CAAGCCCAGA AGCGAAAAGG CTGACCCTGA ATTTTGGCGA
TCCGCGATTA AGCCGATTGG TGAAGCGGTC TCTGGTGCAA CCCTCTTGCT TGAAAATGAC
ACGTGGATTG AAACCACCTT GCAACCGGCC AGCGAAGAGG AAATTGAAGG GACATTACGC
GTCATGGGCG GCGATGATTG GGAAAACTGG ATTGATACCT TGATCAATGC CGAATCACTC
GCCGAAGGGT GCAAAACGAT CGCGTTTTCT TACATGGGCC CTGACGTTAC TCACCCTATC
TATCTGGATG GTACTTTAGG CCGCGCTAAA ATCGATTTAC ACCAAACGAG TCATGCTTTG
AATCTGAAAC TCGCCAACTT TGATGGCGGT GCGTATGCCG TTGTTTGTAA GGCGTTAGTG
ACAAAAGCCA GCGTATTTAT TCCCGGTTTG AGTCCTTACT TACTCGCGCT GTACCAAGTA
ATGAAAAATA AAGGCACCCA TGAAGGTTGC ATTGAACAGA TGCAGCGCCT GTTTAGCGAC
AAGCTGTATG GCCATTCACG AATTCCACTC GATAGCGAAC GTTTGATCCG TATGGATGAT
TGGGAGATGA ACCCCGATAC GCAAGTACAA GTTCGTGAAC GTTTACAACA AATGAATGCC
AGCAATTTTC AGCAGTTAGG CGATTATGCG GGTTTTAAAC GTGAGTTTAT GCAGCTTAAC
GGGTTTGAAT TTGACCAGAT CGATTATAGC CAATCTGTTG ATATGCATAA TTTTATTAAT
AAAAAGTGA
 
Protein sequence
MHIKPIIQGV VARSAHPYGC EQAVLQQIQY VKQANPIKSG PKRVLILGAS SGFGLAARIA 
LTFGGAQADT IGVSFERAPS ETQTGSAGYY NNLFFKQHAE QAGRIAVNLE GDVFSVDMRE
QVIEAIETYF EGEVDLIIYS IASGMRRKPR SEKADPEFWR SAIKPIGEAV SGATLLLEND
TWIETTLQPA SEEEIEGTLR VMGGDDWENW IDTLINAESL AEGCKTIAFS YMGPDVTHPI
YLDGTLGRAK IDLHQTSHAL NLKLANFDGG AYAVVCKALV TKASVFIPGL SPYLLALYQV
MKNKGTHEGC IEQMQRLFSD KLYGHSRIPL DSERLIRMDD WEMNPDTQVQ VRERLQQMNA
SNFQQLGDYA GFKREFMQLN GFEFDQIDYS QSVDMHNFIN KK