Gene VC0395_0699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0699 
SymbolartQ 
ID5134506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp760629 
End bp761318 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content50% 
IMG OID640531021 
Productarginine transporter permease subunit ArtQ 
Protein accessionYP_001215536 
Protein GI147672019 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.127181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTTAA CGGGCTACTC TTTATCACTG GTACAAGCAA GCTGGATGAC GCTACAAATT 
GCGTTGGCCA GCTTGCTGGT CGGTTTACTG TTGGCACTGG TGTTTGCTGG CGGTGAAATG
GCAAAACTGA AATTGATCAA ATGGCCAACC ACCTTGTTGG TCACCGTGAT CCGCGGTTTG
CCTGAGCTTT TGGTGGTGCT GTTTATCTAC TTTGGCTCGA CCCAAGTGCT GTTTTTCATC
ACTGGTGAAT TTATTGAGAT CAGCCCGTTT ATCTCTGGTG TGATTGCGCT CTCGCTGATT
TTTGCTTCGT ACGCTTCGCA GACGTTGCGC GGTGCACTCA AAGCCGTGGG CAGAGGACAG
CGTGAAGCGG CCAGCGCGTT AGGGATTCCG CCTAGCCATG CATTTATTCG TATTGTGCTG
CCGCAAGCGG TACGCCACGC ACTTCCCGGT TTAATGAACC AATGGCTAGT ATTACTTAAA
GATACGGCGT TAGTTTCTTT GATTGGGGTG ACGGATCTAC TGAAACAAGC GCAGCTCACT
TCCGCGGCCA CCCATGAAGC CTTTACGTGG TATGCAACAG CGGCGGTGGT GTATCTGGTG
ATCACATTGA TCACACAACG CGTCGTAAAA GTCATAGATA ACAAGTTTTC GATACAAGGC
ATGAGCCATA GCCAAGGAGC CAGTGCATGA
 
Protein sequence
MVLTGYSLSL VQASWMTLQI ALASLLVGLL LALVFAGGEM AKLKLIKWPT TLLVTVIRGL 
PELLVVLFIY FGSTQVLFFI TGEFIEISPF ISGVIALSLI FASYASQTLR GALKAVGRGQ
REAASALGIP PSHAFIRIVL PQAVRHALPG LMNQWLVLLK DTALVSLIGV TDLLKQAQLT
SAATHEAFTW YATAAVVYLV ITLITQRVVK VIDNKFSIQG MSHSQGASA