| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0646 |
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| Symbol | |
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| ID | 5134154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 710299 |
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| End bp | 711678 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530968 |
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| Product | putative regulatory protein UhpC |
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| Protein accession | YP_001215485 |
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| Protein GI | 147672266 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAATT TCTTTAAAAC CCGCCCCGAT CTGCCTTTAC TCAGCAGCTC AAAAGCGGAA
ATGTTAAAAC GCTACAAAAG CTATCAATGG CAAGTCTTTA TTGGCCTGAT TTTCGGTTAT
GCCATGTTCT ACGTGGTACG TATGGCGCTC GGCGTAGTGA AAAAACCGAT GCTGGATGCT
GGCATCGTCA CCCTCGAAGA ACTCGGCATC ATGGGTTCGG CCTTCTTCTT TACTTATGCC
TTTGGTAAGT TCCTGAACGG CTTTCTATCT GACTACGCCA ACATTGGCCG CTTTATGTCG
TTCTCGCTGC TGCTGTCGGG CGTTGCTTCG ATCTTCATGG GGATGAACAC GGTCGCGTTC
TTCTTCGTTC TGCTGTGGGG CTTGAACGGT TGGTTCCAGT CGGTCGGTTC TGCACCATCT
TGCGTCTCTA TCTACCAATG GTTCTCTCCA AAGCAACGTG GTAGCCGTTA CTCCATCTGG
GGCGGCTCAC GTAACATCGG TGAAGGTATC ACTTGGATCC TAACCGCAAG CTTGGTGAGC
TACTTTGGCT GGCGTGCAGG TTTCATCGGT GCGGGTATCG CGGGTGTCGT GGCTTCTCTC
ATCATGTTTA AGCTACTGAA AGACCGCCCA CAAACTTATG GTATGCCTGA TCCAGGCACA
GCGTTTGAGG AAGGCACGGA AATCAAAAAA GCCAACGATC CAAAAGAAAC ACGCCGTGCG
CAAATGTTCA TCCTGAAGCA ACCTGTGGTA TGGCTTATCG CTCTGGCTTG TGCGGCGATG
TACATCTCTC GCTACGCCAT GTCTTCTTGG GCAGTGCTGT TCCTGCAAGA GCAAAAAGGC
TACTCACTGA TTGACGCTGG TTTTGCCATG TCCATGTACC CAACTGCGGG TCTGGCTGGT
GCGATTCTGT CAGGTATCTT GTCTGACAAA GTGTTCAAAG GTAACCGTAA CATCCCTAAC
CTGCTGTACG GATTGACCAA CATCGCTGGT ATGTGTCTGA TGTTCTTCGG CCCAGATAAC
CGTATCGTTG ATGCTGTAGC ACTGAGCATG ATCGGCTTCT CGATCGGTGG TCTAGTCGTG
TTCCTTGCCG GCCTTATCGC TTGTGACCTA ATGCCGAAAA ACGCAGTCGG CGCCGTGAAA
GGCCTGATCG GTCTCTGTTC TTACATCGCT GCTTCTGCTC AAGAACTTAT CTCTGCATCA
CTGATCACAG TGACTGAAGT CGAAGGCGTA AAACATTACG ACTTCGGTAA CGCTCAGTAC
TTCTGGTTGG CTGCTGGGGT GGTTTCAGTA CTACTCGCCC TAACCGTGTG GAATGCCAAG
AAAGTCGTCG ATATCGACGA AGCAGAAGGC AAGCCGTTGA AAACCCAAAC CGCTTCTTAA
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| Protein sequence | MLNFFKTRPD LPLLSSSKAE MLKRYKSYQW QVFIGLIFGY AMFYVVRMAL GVVKKPMLDA
GIVTLEELGI MGSAFFFTYA FGKFLNGFLS DYANIGRFMS FSLLLSGVAS IFMGMNTVAF
FFVLLWGLNG WFQSVGSAPS CVSIYQWFSP KQRGSRYSIW GGSRNIGEGI TWILTASLVS
YFGWRAGFIG AGIAGVVASL IMFKLLKDRP QTYGMPDPGT AFEEGTEIKK ANDPKETRRA
QMFILKQPVV WLIALACAAM YISRYAMSSW AVLFLQEQKG YSLIDAGFAM SMYPTAGLAG
AILSGILSDK VFKGNRNIPN LLYGLTNIAG MCLMFFGPDN RIVDAVALSM IGFSIGGLVV
FLAGLIACDL MPKNAVGAVK GLIGLCSYIA ASAQELISAS LITVTEVEGV KHYDFGNAQY
FWLAAGVVSV LLALTVWNAK KVVDIDEAEG KPLKTQTAS
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