| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0643 |
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| Symbol | |
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| ID | 5134589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 706364 |
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| End bp | 708733 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530965 |
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| Product | putative phosphoglycerate transport regulatory protein PgtB |
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| Protein accession | YP_001215482 |
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| Protein GI | 147671605 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4192] Signal transduction histidine kinase regulating phosphoglycerate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.787041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTGA CCACTCGCCA CACCATAGGC GCAAGACTGT TGCTGGCATT TGCGTTCAGC
ACTTCGCTTT TGACTATCGT GAGCTTAGTG GCTTGGGGTA CATGGAGCCG ACTGGATTAT
CAAGTGGCGG AACTGCTCAA TCAAAGCGTA CCCAAGTATA ACACCAGCTA TGTATTGGAA
ACCCGCAGTT CAGAGATTCG CAGACGAATT CAACTGATCG TCAGTGCAAC CAGCAAAGTG
ACACTCAACC AGCAATATCA GCGTTTGCAA GAGGATTTCA CCGCGATCCA CGCAGCGTTG
GCGAGTTTGC CACAAAATGA ACAGCAAGCG GCGCTGCAAC AAGGGTACAC AGAGTTGCGG
CAAACCACGC AACAGATTAA CGATCTGGTT TCGGCTCGGA TTGATGTCGA CCGACGTTTA
GCTCTGTTTG CGGAGCAGTT GGATTGGCTG CATCAAGATA TTGGGATGGA GCTGTCGCCG
ATGCGCCAAG AGCTGCAGTG GCAATTAGAG CGAGGTGGCG CAGCCCAGCC ACAAGCCCAA
GTGATGTTTC AGACCATTAA TCTTATTCAA ACTATCTTAG ATGGTGAAAC CCAAGCCTTT
TTGTTTGTGG ATGAACTACT GAAAGCCAAG CATCTCACCC AAGTGGATAA CGGCATGCGC
GTTTTGCAGT ATCGACTTGA TGAATTGAGC CGATTAAGCC AACCGCTATT TACTCAGCCA
TCGTCGATTG CCTATCAACA ACTGCTTGAA GAGTGGCGTA ATGTGCTGCG TTTAGAGGGC
GATTTTCAGC AAAGCCTGCG TGATAGGGTG GTGCTGACCC AAAAGTTAGA GAGCACGAGT
GAACAACTGC AAATTCAGCT CGATCAACAG CATACGGCAA TCGCAGATTT GGTGGCGAAT
GCGGATGCGC TGTTTGTACA AGTCAAAGGA CAAACGGCTC AATTGGTGCA AGAAGGTAAC
CGAGTGCTGC TGATCTGCTT TGGGCTCTCC ATCGGTTTGA GCTTGTTGCT GATGTATTAC
TTTGTGCATA AACGGATTGT CGGACGCTTA CACCGCTTAA GTGAAAGCTT GGATGCGATT
ATTCATAACG ATCTTTCTCA CCCGATCACC GTGGATGGTA AAGACGAGAT CGGGGCATTG
AGTGAACAGC TCATCTTGTA TGGCAAAAAA GTGGAAGAGA TGGAACGCAC TAACGCGTTG
AGTCTCATCA ATAACACGCA AGCGAGTCTG ATCACCTGTG ATCGGTATGG GCAAATTGAA
TCCGCCAACC CGAGTGCGAT GGCCACGCTG CGTTTAGAAT CTCTCGCGCA ACCCTTGACG
CTATGGAGCT GTTTTGCTAA ACACGTACAA CCTAAAGTCG GTCAATTATT TGATAAGAAA
GGGAATTTAA TTCAGAAAGG GGCGGAGAGT TTAACCTTAT CACTCGGTAA TCCAGAAAAG
CCTCATTACT TGCGCCTCTA TTTGCGCCGC TACAGCCAAG GCTTGCACGA TAAAATCATT
GTCACCATCA CCGATGTGAC CGACCAAGAA CACGCCAATC GCTTGTTAGA GCAACGAGTC
AAAGAGAAAA CCCAATCACT GCGCGAGAAA AACCGTGAGT TACAAGCGGA GGTCGAAGAG
CGCCAGCGCG CTGAAGCGCA CTTGAAGAAA ACACAAGGCG AGCTGATCCA AGCGGCGAAA
ATGGCGGTCG TTGGGCAGAC CATGACCAGT CTTGCCCATG AGTTGAATCA GCCGTTGAGT
GCGATGTCGG CTTATCTGTT TTCAGCTCGA TTGGCATTAG AGGAGGCACC ACAGGCTCAA
CTGGCAACAT CGCTCGACCA TATCGAAAAT CTCACTGAGC GAATGGGTAA GATTGTGAAC
AGTCTGCGCC ATTTCGCCCG CAAAAACAGC AGCGATGAAT CGTTGCAGCC CGTGCGGCTC
AACAGCGTTG TAGAACAAGC ATTGGTATTG GTGCAAACCA AAGCGAAACG ACAGCAGATC
AAACTTATCA ATACCTTACC CGATGATCTC ATGGTAATGG CGGATGCATT GAGTTTAGAG
CAGGTCTTAA TCAATCTGAT TGTGAATGGC TGTGATGCTT CAACAACCTT CGCGCAACCT
TGGGTCAAGC TGATTGCGTT AGGCACAGAG CAAGGGATGC AGCGGATTGC GGTGATTGAT
AGTGGGCAGG GTTTTGAACA CGAAGTCGTT GATAAATTAT TTACCCCATT TACTACCACC
AAAGAGGTGG GCTTGGGGCT TGGGCTGAGC ATTTGCCAGT CATTAGTGGA AAAGATGCAA
GGCCGGATTG CACTGGCCTC TAATTTGGAA AAAGGTGCAA TGGTTATTTT GGAGTTACAG
CAAGATGAAA AGTACCGTAC TGCTGATTGA
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| Protein sequence | MSLTTRHTIG ARLLLAFAFS TSLLTIVSLV AWGTWSRLDY QVAELLNQSV PKYNTSYVLE
TRSSEIRRRI QLIVSATSKV TLNQQYQRLQ EDFTAIHAAL ASLPQNEQQA ALQQGYTELR
QTTQQINDLV SARIDVDRRL ALFAEQLDWL HQDIGMELSP MRQELQWQLE RGGAAQPQAQ
VMFQTINLIQ TILDGETQAF LFVDELLKAK HLTQVDNGMR VLQYRLDELS RLSQPLFTQP
SSIAYQQLLE EWRNVLRLEG DFQQSLRDRV VLTQKLESTS EQLQIQLDQQ HTAIADLVAN
ADALFVQVKG QTAQLVQEGN RVLLICFGLS IGLSLLLMYY FVHKRIVGRL HRLSESLDAI
IHNDLSHPIT VDGKDEIGAL SEQLILYGKK VEEMERTNAL SLINNTQASL ITCDRYGQIE
SANPSAMATL RLESLAQPLT LWSCFAKHVQ PKVGQLFDKK GNLIQKGAES LTLSLGNPEK
PHYLRLYLRR YSQGLHDKII VTITDVTDQE HANRLLEQRV KEKTQSLREK NRELQAEVEE
RQRAEAHLKK TQGELIQAAK MAVVGQTMTS LAHELNQPLS AMSAYLFSAR LALEEAPQAQ
LATSLDHIEN LTERMGKIVN SLRHFARKNS SDESLQPVRL NSVVEQALVL VQTKAKRQQI
KLINTLPDDL MVMADALSLE QVLINLIVNG CDASTTFAQP WVKLIALGTE QGMQRIAVID
SGQGFEHEVV DKLFTPFTTT KEVGLGLGLS ICQSLVEKMQ GRIALASNLE KGAMVILELQ
QDEKYRTAD
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