| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0641 |
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| Symbol | |
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| ID | 5134039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 705127 |
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| End bp | 706446 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530964 |
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| Product | phosphoglycerate transport system transcriptional regulatory protein PgtA |
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| Protein accession | YP_001215481 |
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| Protein GI | 147672489 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCACTGGC CTCTAATTTG GAAAAAGGTG CAATGGTTAT TTTGGAGTTA CAGCAAGATG
AAAAGTACCG TACTGCTGAT TGATGACGAT CAGGATGTGT TGGATTCCTA CCTACATTTG
ATGTCGATTG CCGGATTAAC CGCCAAAGCG GTGATCGATC CTACTCAAGC CATGAGCCAC
ATCCAACCCG ATTGGAATGG CGTCGTGCTG CTGGATATGT ACATGCCTCA ACTGCATGGC
ATGGAATTGC TCAAGCAGAT CAAAGCCGTA GACGACAAAA TTCCGGTCAT CGTGATCACA
GGACACGGTG ATATCCCGAT GGCGGTGGAA GCGGTCAAAA TGGGCGCGTG TGATTTTCTC
GAAAAACCGA TCAATCCTCC GCAATTGCTC ACGCTGATCA AGCAACATCT TGAGCTGCGT
CGCTCGTTCA TCGAGCAAAA GCTGCTGTTA TCCCGTTCAG TCAAACGTGA ATTAGTCGGA
AAATCAGCAC AAATGGAGCA AATTCGCTCT CATGTGGCGC AATATGCGCT GCTGAATCGC
CATGTGGTGA TAGTGGGGGA GTCGGGCTGT GGGCGGCACA CCATCGCCTA CCTTATCCAT
CAACTGACCA CCAATAACGG TCACTTGCCC TGGGTTGAGT TAGTCGCTTC GGCCAAAACC
GAGTGGAGTA CCGTTGAACC TAAAGTGCAA GAGAGTGCGG GTGGAACCTT GTTGATTGAC
CATATTGAGT TGCTCAGCGA GGAAGTGCAG CGCAATGTGG TACAGAGTTT ACTCAACCAA
GAGCGACTCA ATCGCCCCAG AACGCGAGTG ATTGCGGTGA TTGATCAGCC ACCCGAGCAG
TTAATTGCTC AAAACCAGCT TTTGCCAGAG CTTTACTATT TGCTCAATCA AGGGCAGATC
GATGTGCCTT TGTTGCGTCA AAGACCCGAT GACATTGCGG CGCTGTTTCA CTACTTCCTA
AAACAGAGCT GCTATAAGCT CGGCAAACCC ATGCCCAATG TTGAGCCGCA TTATCTTGCC
TTGTTGCGCG CCCACCAATG GCCGGGGAAT GTGCGCGAGC TGCGTAATGT GGCGGAGTTG
TATGCGATTG GCATTGTAAA ACTGGCGGGC AAAGAGCGTC TCTACAATCA AGAAGAGATG
CTGTCGCCAT TGGATGAGCT GGTGGACGAT TACGAAAAGC AAGTGATTGA AGATGCGCTG
TTTCTGTTTT CTGGCCGAGT AGCCGATGCC GCGAACTACC TACAAGTGCC GCGTAAAAAG
CTCTATCTGA GAATGAAAAA GCATGGTTTA GAGAAAGATG CGTTTAAAGC CCGAGGTTAG
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| Protein sequence | MHWPLIWKKV QWLFWSYSKM KSTVLLIDDD QDVLDSYLHL MSIAGLTAKA VIDPTQAMSH
IQPDWNGVVL LDMYMPQLHG MELLKQIKAV DDKIPVIVIT GHGDIPMAVE AVKMGACDFL
EKPINPPQLL TLIKQHLELR RSFIEQKLLL SRSVKRELVG KSAQMEQIRS HVAQYALLNR
HVVIVGESGC GRHTIAYLIH QLTTNNGHLP WVELVASAKT EWSTVEPKVQ ESAGGTLLID
HIELLSEEVQ RNVVQSLLNQ ERLNRPRTRV IAVIDQPPEQ LIAQNQLLPE LYYLLNQGQI
DVPLLRQRPD DIAALFHYFL KQSCYKLGKP MPNVEPHYLA LLRAHQWPGN VRELRNVAEL
YAIGIVKLAG KERLYNQEEM LSPLDELVDD YEKQVIEDAL FLFSGRVADA ANYLQVPRKK
LYLRMKKHGL EKDAFKARG
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