| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0547 |
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| Symbol | |
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| ID | 5134172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 603232 |
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| End bp | 604629 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530869 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001215386 |
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| Protein GI | 147672485 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000000207209 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT TCGATCCCCT CTCGTCATAT AGCCCAACTC ACTGGCGTAG TGAAGGTGAT
ATCAATACCA CCGCCGCACG TCGCGACTGG CTAACGCATG TGAATGATGA AACTACTCAG
AATTTATTAC AACGTGACGC GAATGTGTTT CTGCATCAAG CCATGTCCAC ACCTTGCCTC
GCTCCATTGG CCAGTGCAGC GGGCTGCTAT TTGTATGATG TATCAGGGAA AAGTTATCTC
GATTTTCATG GCAATAATGT GCATCAACTC GGTCATGGTC ATCCGCAGGT GATCGAAAAA
ATCACCGAAC AGATGCAAAC CTTACCTTTC GCCCCGCGCC GTTTTACCCA TGAAACCGCG
ATTCGCTGCG CAGAAAAGCT CACGGAGATT GCTGGCGGTG AGCTAAACCG AGTGCTGTTT
GCTCCCGGCG GTACTTCAGT GATTGGTATG GCGCTCAAAT TAGCGCGTCA TATCACGCAG
AATTTTAAAG TGGTCAGTTT GTGGGATGCT TTTCATGGCG CGTCGCTGGA TGCGATCTCC
GTTGGCGGCG AAGCTTGTTT CCGCCAAGGC ATGGGGCCAC TGATGGCAGG CGTGGAGCGC
ATTCCTCCGG CTATCACCTA TCGCGGTGCA TTTCCCCGAG AAGACGGCAG CGATGTGCAC
TACGCCGATT ACTTGGAATA CGTGATTGAA AAAGAAGGCG GCATTGGCGC ATTCATCGCC
GAAGCGGTAC GCAATACCGA TGTACAAGTA CCAAGCCGCG CCTATTGGCA ACGCGTAAGG
GAGATCTGCG ATAAACACAA TGTGCTTTTG ATCATTGATG ACATTCCCAA CGGTATGGGG
CGCAGCGGTG AGTGGTTTAC TCACCAAGCG TTCGGCATCG AGCCCGATAT TTTGTGTATC
GGCAAAGGTT TGGGGGCTGG GCTTATCCCG ATTGCCGCCC TACTTACCAA AGAAAAATAC
AACACGGCTG CACAAGTTTC TTTGGGTCAC TACACCCATG AAAAAAGCCC ACTCGGCTGC
GCTGCAGCAT TAGCCACGAT TGAAGTGATT GAGCAGCACA ACTTACTCGC CAAAGTGCAT
GCTGATAGCA TTTATATGCG TCAACGTCTT AGTCAAATGC AGCAGCAATT TTCACTGATT
GGGGATGTGC GCGGTATCGG ATTGCTTTGG GGCATCGAAC TGGTGATCGA TCGCCACACC
AAACAGCGTG CTCACGATGA AGCCGAGGCC ATACTCTATC ACTGCTTACG TCATGGGCTG
AGCTTTAAAG TCTCACAAGG CAATGTGATT CAACTTAGCC CGCCATTGAT CATTTCACGC
CAAGAGCTGG ATCAAGCTCT CGATATTCTC TATTCCGCTT TGCTCGCAAT TAGCCAGCAA
ATGAATTACT CATATTAA
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| Protein sequence | MKTFDPLSSY SPTHWRSEGD INTTAARRDW LTHVNDETTQ NLLQRDANVF LHQAMSTPCL
APLASAAGCY LYDVSGKSYL DFHGNNVHQL GHGHPQVIEK ITEQMQTLPF APRRFTHETA
IRCAEKLTEI AGGELNRVLF APGGTSVIGM ALKLARHITQ NFKVVSLWDA FHGASLDAIS
VGGEACFRQG MGPLMAGVER IPPAITYRGA FPREDGSDVH YADYLEYVIE KEGGIGAFIA
EAVRNTDVQV PSRAYWQRVR EICDKHNVLL IIDDIPNGMG RSGEWFTHQA FGIEPDILCI
GKGLGAGLIP IAALLTKEKY NTAAQVSLGH YTHEKSPLGC AAALATIEVI EQHNLLAKVH
ADSIYMRQRL SQMQQQFSLI GDVRGIGLLW GIELVIDRHT KQRAHDEAEA ILYHCLRHGL
SFKVSQGNVI QLSPPLIISR QELDQALDIL YSALLAISQQ MNYSY
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