Gene VC0395_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0546 
SymbolphnW 
ID5134738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp602111 
End bp603214 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content50% 
IMG OID640530868 
Product2-aminoethylphosphonate--pyruvate transaminase 
Protein accessionYP_001215385 
Protein GI147671759 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID[TIGR02326] 2-aminoethylphosphonate--pyruvate transaminase
[TIGR03301] 2-aminoethylphosphonate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000447311 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATG CTTATCTACT GCTGACACCG GGACCGCTTT CCACCTCAGA ATCCGTGCGT 
GAAGCCATGC TTAAAGACTG GTGTACTTGG GATGATGATT ACAACTTAGA AATTGTTGAA
GTGATCCGCC GCAAACTCGT CACACTGGCC ACCACACAAT CCGGTTACAC CTCGGTGTTG
ATGCAAGGCA GTGGCACCGC TTCGGTAGAA GCCACCATTG GAAGCGTGAT GTTACCCACC
GATAAGCTGC TCGTGATTGA TAACGGTGCT TATGGCGCAC GCATCGCGCA AATCGCGCAG
TACCTGAATA TCGCATGTCG TGTTATTGCT CCCGGAGAAA CGGCGCAGCC TAATCTTGAT
GAGATTGCCG ATGTGCTGAC CCATGATCCG GCAATTACGC ATGTGGCGAT TGTGCACTGC
GAAACCACCA CCGGCATGCT GAACCCGATT GCTGAGGTGG CTAAGATCGC TAAACAGCAT
GGCAAGCGTG TGATTCTCGA TGCGATGTCG AGCTTTGGCG GTATTCCGAT GGATATTGGT
GCTCTGGGTA TCGATTTTAT GATCAGCTCA GCCAACAAAT GCATTCAAGG GGTGCCGGGA
TTTGGTTTTG TGATTGCCAA ACGCAGCGAG CTTGAACAGT GCCAAGGCCG CGCACGCTCA
CTCACTTTAG ATTTGTTCGA CCAATGGCAA TGTATGGAGA AAAATCACGG CAAGTGGCGT
TTTACCTCTC CCACTCATAC GGTTCGTGCG TTCTACCAAG CGTTACTTGA GTTGGAGAGC
GAAGGTGGCA TCGCGGCGCG CTATCAGCGT TATCAGACCA ATCAGACCCA ATTGGTGAAA
GGCATGCGTG AACTGGGTTT TGCCCCGTTA CTCCCAGAAA AGCTACATTC CCCCATCATC
ACCTCTTTCT ATTCACCTGA ACATTCGGAT TACCAGTTTG CCGAGTTTTA TCAGCGCTTA
AAACAGCAAG GCTTTGTGAT TTATCCCGGC AAAGTCAGTC ACGCCGACTG TTTTCGGATT
GGCAATATTG GTGAGGTGTA TCCGCAAGAT ATTGAGCGCC TACTGAGCGC CATGCAGCAC
GCAATATATT GGCAACAAGC GTAA
 
Protein sequence
MKNAYLLLTP GPLSTSESVR EAMLKDWCTW DDDYNLEIVE VIRRKLVTLA TTQSGYTSVL 
MQGSGTASVE ATIGSVMLPT DKLLVIDNGA YGARIAQIAQ YLNIACRVIA PGETAQPNLD
EIADVLTHDP AITHVAIVHC ETTTGMLNPI AEVAKIAKQH GKRVILDAMS SFGGIPMDIG
ALGIDFMISS ANKCIQGVPG FGFVIAKRSE LEQCQGRARS LTLDLFDQWQ CMEKNHGKWR
FTSPTHTVRA FYQALLELES EGGIAARYQR YQTNQTQLVK GMRELGFAPL LPEKLHSPII
TSFYSPEHSD YQFAEFYQRL KQQGFVIYPG KVSHADCFRI GNIGEVYPQD IERLLSAMQH
AIYWQQA