| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0545 |
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| Symbol | |
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| ID | 5134970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 600859 |
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| End bp | 601878 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530867 |
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| Product | ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_001215384 |
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| Protein GI | 147671616 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | [TIGR03261] putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.001131 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGAGGA TGATGAACAA GCGTATATTG AAAGGAACCT TAACAGCGAT CGCAGCACTT
ATGTCTGCTC ATGCGTTTGC GGGACAAGAA GTCACGGTGT ATACCGCATT TGAAACCGAT
CTGCTGGCGA AATACAAAAG CGCTTTTGAA AAAGAGAACC CAGATATTGA GATTAAGTGG
GTGCGCGATT CAACTGGGAT CATGACGGCC AAACTGCTGG CTGAAAAAGA CAACCCACGT
GCAGAAGTGG TGTGGGGATT GGCTGGATCT TCAATGGCTC TCCTCAAAGA TCAAGGAGTG
CTAAAACCTT ACACACCCAA AGGAGCGAAC GAGTTACGAG CTAATTTGAA CGATCCGCAG
GCTCAGCAAG CTTGGTATGG CAACGATGCT TTTTTTAACG CGGTATGCTT TAACGAAGCG
GTGGCAAAAC AGCTGAATTT ACCTAAGCCA CAGAGTTGGG AAGATTTGAC TAACCCTGTC
TACAAAGGCC ACATTGCGAT GCCTAACCCT GCATCTTCCG GCACGGGGTA CATGCAAGTT
TCCGCATGGC TGCAAAACAT GGGCGAAGAT AAAGCGTGGG ATTACATGCA ACGCCTTGAT
CAAAATATTG CCCATTACAC ACATTCTGGC TCAAAACCTT GTGTTCAAGC GGGGATGGGA
GAGGTTGCGA TCGGCATATC AATGGCAACG CGTGGCGCAA AACTCAAAAC CCAAGGCGCA
CCGTTGGATG TGATTGTACC AAACGGTATT GGCTGGGAAT CCGAAGCGGT AGGGCTCGTC
AAAGAAAGTG ATGCGGCAAA GCGTGTGGTC GATTGGTCTG TCTCGAAAGC GGCAAATGAG
CTGTATATTG AGAGCTATCC TATCGTTGGC CATCAGGACG TCAGCAAGCA AGTGCCGAAT
TATCCGAATG TTGAAAAAGT GATGGCGAAG ATGGACTTCA CGCAAATGGG CGTCGATCGT
GCCCGCGTGC TGCAAACCTG GTCTGAAAAG TTTGATGCTA AATCGGAACC CAAATCTTAA
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| Protein sequence | MERMMNKRIL KGTLTAIAAL MSAHAFAGQE VTVYTAFETD LLAKYKSAFE KENPDIEIKW
VRDSTGIMTA KLLAEKDNPR AEVVWGLAGS SMALLKDQGV LKPYTPKGAN ELRANLNDPQ
AQQAWYGNDA FFNAVCFNEA VAKQLNLPKP QSWEDLTNPV YKGHIAMPNP ASSGTGYMQV
SAWLQNMGED KAWDYMQRLD QNIAHYTHSG SKPCVQAGMG EVAIGISMAT RGAKLKTQGA
PLDVIVPNGI GWESEAVGLV KESDAAKRVV DWSVSKAANE LYIESYPIVG HQDVSKQVPN
YPNVEKVMAK MDFTQMGVDR ARVLQTWSEK FDAKSEPKS
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