| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0543 |
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| Symbol | |
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| ID | 5134223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 597839 |
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| End bp | 599617 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530865 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_001215382 |
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| Protein GI | 147671497 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | [TIGR03262] putative 2-aminoethylphosphonate ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTACCG TCGTAAGGTC ATGTCGACAA CGCCAGCAGC TACAGCCAGC TGTGCTTATG
CGGCTTAAGG AGAAGAGTAT GTTGAATGTT GCTCGTACTT TTTCAGTGCG GATATTGCCG
CATTGGAGCC GCGATAGCCT AATTTTATCG ACCACCTTAT TGATCCTGCT ATCACTGATG
CTGTTGTTTA TTGTCGCGCC GTTGGCCGCT ATGTTGTTGA AAAGCGTGCA AAATGGGCAG
GGTGAATTTG TCGGGCTCGC TTACTTCGCC CAATATTTTT CCTCGGCAGC GCTCTGGCAA
TCTTTGCGCA ACACCTTAGT GCTTGGTATC AGTGTGACGG CGATTGTCGG TATCCTCGCG
TTTGGTTACG CCTATGCGTT AACGCGCTCC TGCATGCCGG GAAAACATCT GTTTCGAGTG
TTAGGCAGTG CGCCGATTCT CGCGCCTTCA TTACTGCCCG CGATCAGTCT GATTTTTCTA
TTTGGTAATC AAGGCATGCT CAAGAGTTGG CTCGGCGGTG AATCCATTTA TGGTGGCTTA
GGTATTACGC TCGGGTTGAT TTTCTGGACA TTTCCGCATG CTTTGATGAT TCTGACCACC
TCGCTGAGCA CCTCAGATGC TCGTCTGTAT GAAGCGGCGA GGGCGCTGAA AACATCCCCC
ATCAAAACGT TTTTTATTGT CACGCTACCG GCAGCCAAGT ATGGGTTGAT CAGCGCCTTG
ATCGTTGTGT TTACCTTGGT GGTGTGTGAT TTCGGCGTAC CGAAAGTGAT TGGTGGCAGC
TATAACGTGC TTGCAACGGA CATTTTCAAG CAAGTAGTGG GGCAGCAAAA TTTCGCGATG
GGCGCGGTGA CCAGTATTGT GCTGTTGCTA CCCGCCGTGT TTGCGTTTAT TGCCGATCGC
TGGGTGCAGA AAAAACAGCA AAGCCTATTT GATACCCGTT CTGTGGCTTA CCAACCAGCG
CCACATCGGC TGCGTGATGG TTTATGTCTG CTCTATTGTG TGCTGATTTG TGTGGCGATT
GTGGCGGTAT TAGCCACGGC GGTGTACGGC TCACTGGTGA CGTTTTGGCC GTGGAATACA
GCGCTGACAC TCAAACATTA CCAATTTGCC GAAACCAGTG CCTATGGTTG GAGCCCGTAT
TTTAACTCAC TCACCCTAGC CAGCTTAACC GCACTGTGTG GGACGGTGAT CATTTTTCTC
GGCGCTTACA GTATTGAAAA AGGGCGAGTG TTCGCGCTGC TGCGTCAGGC GATGCAGATG
CTGAGTATGG TACCGATGGC GGTTCCCGGC TTAGTGCTGG GTTTAGGTTA CATCTTCTTT
TTCAATCACG CGTCTAATCC GCTCAATGGC TTGTACGGTG GCATGCTGCT TTTGGTGATC
AATACCGTGG TGCATTACTA CACGGTGGGG CATATGACGG CGGTTACCGC GCTTAAACAG
TTGCCACCTG AATTGGAGGC GACGGCGGCC TCCATCAAGC TGCCGCAATA CCGCTTACTT
TGGAAAGTGA CGTTACCTGT CTCCTTGCCT GCGGTATTGG ACATTGCTAG CTATTTGTTT
ATTAATGCAT TAACCACCAC TTCTGCGGTA GTATTCCTCT ACTCAACCGA CACCGTACCC
GCATCGGTTG CGGTATTGAA TATGGATGAT GCCGGGCAGA CGGGCGCCGC CGCTGCCATG
GCGGTGATGA TTATGCTCTC GGCCGCGTTA GCCAAATTGC TGCATGTGGG ATTAGAGTTT
GGATTGTTTG GCCGCCTGCA AGCTTGGCGC AAGCGTTAG
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| Protein sequence | MRTVVRSCRQ RQQLQPAVLM RLKEKSMLNV ARTFSVRILP HWSRDSLILS TTLLILLSLM
LLFIVAPLAA MLLKSVQNGQ GEFVGLAYFA QYFSSAALWQ SLRNTLVLGI SVTAIVGILA
FGYAYALTRS CMPGKHLFRV LGSAPILAPS LLPAISLIFL FGNQGMLKSW LGGESIYGGL
GITLGLIFWT FPHALMILTT SLSTSDARLY EAARALKTSP IKTFFIVTLP AAKYGLISAL
IVVFTLVVCD FGVPKVIGGS YNVLATDIFK QVVGQQNFAM GAVTSIVLLL PAVFAFIADR
WVQKKQQSLF DTRSVAYQPA PHRLRDGLCL LYCVLICVAI VAVLATAVYG SLVTFWPWNT
ALTLKHYQFA ETSAYGWSPY FNSLTLASLT ALCGTVIIFL GAYSIEKGRV FALLRQAMQM
LSMVPMAVPG LVLGLGYIFF FNHASNPLNG LYGGMLLLVI NTVVHYYTVG HMTAVTALKQ
LPPELEATAA SIKLPQYRLL WKVTLPVSLP AVLDIASYLF INALTTTSAV VFLYSTDTVP
ASVAVLNMDD AGQTGAAAAM AVMIMLSAAL AKLLHVGLEF GLFGRLQAWR KR
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