| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0535 |
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| Symbol | |
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| ID | 5134151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 589245 |
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| End bp | 591080 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530857 |
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| Product | putative peptide ABC transporter, periplasmic peptide-binding protein |
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| Protein accession | YP_001215374 |
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| Protein GI | 147671720 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGAGGG AGAAAGCCAT GCGCAGTTGG AAGCCGATTG CTTTAGGAGT GACGCTCGCG
TTATCGAGCC AATTCAGTTG GGCGGCCGTG ATAGAAACCA CTCGGCTGGT TGGGTTTGGG
GAAGCTAAAT ACCCAGAAAA CTTTACGCAC TTTGATTATG TCAACCCACA AGCCCCCAAA
TACGGCAAAG TGACCTTCGG TGAGTTGGGC ACATACGACA ACTTTAACCG TTTTGCTTCA
CGTGGCGTGG CGGCGGCCAA TACCGCAGAG CTGTATGATC CTCTCATGTT TTCTCCTGCG
GATGAAATTG ACTCTTACTA TCCCTTGATT GCCAGTAAAA TTCGCTATTC CGATGATTTC
ACTTGGCTGG AAATTGATCT CAATCCGAAT GCGCGTTTCC ATGATGGCAA ACCGATCACC
GCGCAGGATG TGGAGTTCTC TTTTGAGAAG TTTATGGCCG AAGGTGTCCC GCAATATCGA
GTGTATTATC AGGATGTAAA ATCCGTGAAA GCCATTGCTG AGCGGACAGT ACGCATTGAA
ATGAAGCAGC CAAACCGTGA ACAGTTATTT AGCTTGGCGC AATCGACCCG AGTCTTACCC
AAACATTACT GGCAATACAA GAATTTGGCC GAGCCGCTCA ATGAGCCTCC CGTTGGGAGT
GGGGCTTATC AAATTGTCGA TTTCAAACCC GGTCAAAGTG TGACCTATAA ACTGAATCCG
GACTATTGGG CAAAAGATTT GCCGGTCAAC GTTGGGCGCA ACAACTTCGC CCAGATCCAG
TACGACTACT ATCGCGATGA CACCGTGATG CTGGAGGCGT TTAAAGCGGG TGAGTTTGAT
TTACGTGAAG AGAACCAAGC CAAGTTCTGG GCGACCTCTT ACACTGGGCG TAATTTTGAC
CAAGGTTTGA TTAAGAAAGA GGAAATTGCT CACCAAGCGC CAGCCTCTAC TCAGGGATTT
ATTTTCAATA CACAGCGTCC TGTGTTCCAA GATGTTCGAG TCCGTGAGGC ACTCAACTAC
GCCTTAGACT TTGAATGGAT GAACAAAAAC CTGTTCTACG ATCAATACCA GCGAACCCGC
AGCTATTTCC AAAACACCGA ATACGAGGCT CAAGGTCTGC CGAATGCCGC AGAACTTGCT
GTGCTCACCC CTTACAAAGA ACAACTACCC GCTCGGGTAT TTACGGAAAC TTATCAGCCT
TCCGTGACCG ATGGCAGCGG ACGAATTCGC ACCCAAATGC GCGAAGCATT TGCCTTGCTG
AAAGAAGCGG GATGGGAGCT GAAAAATAAG GTGATGACCA ACGTCAAGAC TGGTGAGCCA
CTCAGTTTTG AACTGCTGAT TTACAGTCCA ACAACGGAGC GAATTGCGAT TCCTCTGCAA
AAAAATCTGC AACTCATGGG GATTGAGATG AAGATCCGCA CGGTCGACAC CACGCAATAC
ACCAAACGTC TGCGTGATCG TGATTTTGAC ATGATATCGC ACGGCTTTAG CGCGAATCCT
TACCCGAGCC CGAATCTACT GATTGTCTGG AATTCCAATT ATATGGACTC CAGCTACAAC
TCAGCGGGGG CCAATCATCC GGTGCTTGAT GCTCTGACCG AACAAATAGC CAAAAGCCAG
CAAGATACCG AAAAACTTCG CGCACTGGGT TCAGCACTCG ATCGCGTGTT GCAATGGAAT
TTCTACATCA TTCCGCAATG GCATTTGAGT ATGTACCGTG TGGCGATGTG GGATAAATTC
AGCCGCCCAA GTGTGCTACC GAAATATTCT CTTGGTTTAG ACACCTGGTG GATAGATCAA
GAGAAAGCCG CGCGGCTACC TGAAAAACGG CGTTAG
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| Protein sequence | MLREKAMRSW KPIALGVTLA LSSQFSWAAV IETTRLVGFG EAKYPENFTH FDYVNPQAPK
YGKVTFGELG TYDNFNRFAS RGVAAANTAE LYDPLMFSPA DEIDSYYPLI ASKIRYSDDF
TWLEIDLNPN ARFHDGKPIT AQDVEFSFEK FMAEGVPQYR VYYQDVKSVK AIAERTVRIE
MKQPNREQLF SLAQSTRVLP KHYWQYKNLA EPLNEPPVGS GAYQIVDFKP GQSVTYKLNP
DYWAKDLPVN VGRNNFAQIQ YDYYRDDTVM LEAFKAGEFD LREENQAKFW ATSYTGRNFD
QGLIKKEEIA HQAPASTQGF IFNTQRPVFQ DVRVREALNY ALDFEWMNKN LFYDQYQRTR
SYFQNTEYEA QGLPNAAELA VLTPYKEQLP ARVFTETYQP SVTDGSGRIR TQMREAFALL
KEAGWELKNK VMTNVKTGEP LSFELLIYSP TTERIAIPLQ KNLQLMGIEM KIRTVDTTQY
TKRLRDRDFD MISHGFSANP YPSPNLLIVW NSNYMDSSYN SAGANHPVLD ALTEQIAKSQ
QDTEKLRALG SALDRVLQWN FYIIPQWHLS MYRVAMWDKF SRPSVLPKYS LGLDTWWIDQ
EKAARLPEKR R
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