| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0533 |
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| Symbol | |
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| ID | 5134414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 587099 |
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| End bp | 588157 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530855 |
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| Product | putative peptide ABC transporter, permease protein |
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| Protein accession | YP_001215372 |
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| Protein GI | 147671907 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATGGGGA TGACAAAAGC AAGCAAGCGT GTGCCGAATC CGTTGACTGA GGCGCGTTGG
GCGCGATTTA AAGCCAATCG GCGTGGTTTT TGGTCATTGT GGATTTTCTT ATTGCTGTTT
GTAGTGAGCT TGTTTGCTGA GCTTATCGCT AACGACAAGC CACTCCTCAT TCAGTATGAC
GGAGCGTGGT ACATGCCGAT TGTACAGCGT TATAGCGAAA CCCAATTTGG TGGAGAATTT
GATACTGAAG CGGATTACAC CGATCCCTAT GTGGTTAGCT TGATTGAAGA GAAAGGGCAA
ATCATCTGGC CGCTGATCCG TTTTCATTAT GACACCATCA ATTTTGATAT CACCGGCAGT
GTGCCTTCTG CGCCGGATTC AGTGAACTGG TTAGGTACAG ATGATAAAGG GCGCGACGTA
TTAGCTCGGA TCATTTACGG TTTTCGAATC TCGGTGTTGT TTGGTTTTAT TCTCACGGTG
ATTTCGTCAC TGATTGGCGT TTTAATCGGT GCTACGCAAG GCTATTACGG CGGCTGGCTC
GATCTGTTTG GGCAGCGCTT TATTGAAGTG TGGTCTGGCA TGCCAACCTT GTTCCTTTTG
ATCATCTTAT CGAGCTTTGT TGAGCCGAAT TTCTGGTGGT TGCTCGGCAT CATGGTGCTG
TTTAGTTGGA TGAGCTTGGT GGGCGTCGTG CGTGCCGAGT TTTTACGTTG CCGGAATTTT
GATTATGTAC GTGCTGCACA AGCGATGGGA GTCAGTGATA TGCGCATTAT TCTGCGCCAT
ATGTTGCCAA ACGCTATGGT CGCCTCGTTA ACCATGATGC CGTTTATTCT TTCTGGCTCA
GTCACTACTC TCACCTCATT GGATTTTCTT GGCTTTGGCT TGCCGGCCGG TTCACCGTCA
TTGGGCGAAC TGCTCGCACA GGGCAAAGCC AACTTACAAG CGCCTTGGCT TGGTATTTCA
GCGTTTGTGG TGCTGTCGGT CATGCTGACT TTACTGGTCT TTATCGGTGA AGCGGTACGT
GATGCCTTTG ACCCTCATTT ACAACGGAGC CGCGCATGA
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| Protein sequence | MMGMTKASKR VPNPLTEARW ARFKANRRGF WSLWIFLLLF VVSLFAELIA NDKPLLIQYD
GAWYMPIVQR YSETQFGGEF DTEADYTDPY VVSLIEEKGQ IIWPLIRFHY DTINFDITGS
VPSAPDSVNW LGTDDKGRDV LARIIYGFRI SVLFGFILTV ISSLIGVLIG ATQGYYGGWL
DLFGQRFIEV WSGMPTLFLL IILSSFVEPN FWWLLGIMVL FSWMSLVGVV RAEFLRCRNF
DYVRAAQAMG VSDMRIILRH MLPNAMVASL TMMPFILSGS VTTLTSLDFL GFGLPAGSPS
LGELLAQGKA NLQAPWLGIS AFVVLSVMLT LLVFIGEAVR DAFDPHLQRS RA
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