Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0488 |
Symbol | |
ID | 5133939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 545108 |
End bp | 545662 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640530811 |
Product | putative lipoprotein |
Protein accession | YP_001215329 |
Protein GI | 147671979 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.67481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGATTG ATATGAAGCA TAATGCACTA AAAATGGCGC TAATCGCAGT ATTGGGTGTC ACTTCCTTAA CTGGATGTAT GGGACAAATG GCAGCGACCG GACTGGTCAA TAAATTCAAT TTAGAAGTGG TGGATAACCG TTACGCCCGT GAAGGCCTGT TTTTGCTGCT TTCACCCGTC TATGGTTTAA CCAGTACTGC CGACCTGTTT ATTTTTAACT CGATTGAGTT CTGGACAGGT AAAAACCCAA TTTCAGGAAA GTCGCCAGCG GTTGTTGATA TTCCTGCCAA AGCGATTATC AAAGTCAATG GTCAATTGGA TCGCTCTTTG ACAGAAGCAC CACTGAAAGC ACAAGTGCGC CCGATCGAAA AAGCAACGCT AGAACAACTT GATTCGCATA CGCTTCAGAT GGAAGTGACC TATGTCGATG GCAGTCATAA AGTATTGCGT GGCGAAAAAG GTCAAGATGA GGTCACTTTT TATCTAGATG GTGAACTCTT TACCGTTGTT AGCCAGCAAG AGCTCAATGC TTATATCGAG GCAAGCCAAA TTTGA
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Protein sequence | MEIDMKHNAL KMALIAVLGV TSLTGCMGQM AATGLVNKFN LEVVDNRYAR EGLFLLLSPV YGLTSTADLF IFNSIEFWTG KNPISGKSPA VVDIPAKAII KVNGQLDRSL TEAPLKAQVR PIEKATLEQL DSHTLQMEVT YVDGSHKVLR GEKGQDEVTF YLDGELFTVV SQQELNAYIE ASQI
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