Gene VC0395_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0472 
Symbol 
ID5134346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp527971 
End bp528516 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content46% 
IMG OID640530795 
Productputative cytochrome b561 
Protein accessionYP_001215313 
Protein GI147672161 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.73245e-17 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT CAGACAGCCA ACACTATAAC TTGGTCACTC GCAGTATCCA TTGGATTTCT 
GCTTTGGTCG TTATCGGGAT GTTTGCCGTT GGCACTTGGA TGATGGATCT CTCTTACTAC
AGTGAATGGT ACCGCACAGC ACCACACTGG CATAAGTCGG TAGGTTTGTT ACTGGCAGGT
TTGACGTTAT TTCGTCTGAT TTGGAAAGCG TTTTCTTCAT CTCCGAAAAT TGAAGGCGCG
CGCTGGGAAA TCGTAGCGGC TAAAAGTGCT CATCACTTGA TGTACGTTGG ATTGTTTGTT
CTTTTTGTCT CTGGGTATCT CATCTCAACG GAAGATGGTC GAGGTATTGA GGTGTTCAAC
TGGTTTACGG TACCTGGGGC GGGGGCTCTA TTTGAAAACC AAGCGGATAT CGCAGGCAAT
ATCCATTTTT ATACGGCTTG GGGCTTAATC ATACTGGCGG GGCTGCATGC CGTCGCCGCA
CTTAAACACC ACTTTATTAA CCGTGATAAC ACGTTACGTA AAATGCTGAC AGGAGCATCA
AAATGA
 
Protein sequence
MKNSDSQHYN LVTRSIHWIS ALVVIGMFAV GTWMMDLSYY SEWYRTAPHW HKSVGLLLAG 
LTLFRLIWKA FSSSPKIEGA RWEIVAAKSA HHLMYVGLFV LFVSGYLIST EDGRGIEVFN
WFTVPGAGAL FENQADIAGN IHFYTAWGLI ILAGLHAVAA LKHHFINRDN TLRKMLTGAS
K