| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0425 |
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| Symbol | |
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| ID | 5134425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 470134 |
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| End bp | 471684 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530748 |
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| Product | hypothetical protein |
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| Protein accession | YP_001215266 |
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| Protein GI | 147672514 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000280647 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTATT CCGTTGTGCG ATTGATATTG GGTGACCAAC TCAACCATGC TCATTCTTGG
TTTTCTGAGC ATAGGGATGA TGTTTTATAC CTGATTGCAG AGCTGCATCA GGAGCAGGAG
TACGTTCGCC ATCACATTCA AAAGCAGTGT GCATTTTTTG CGGCCATGCA AGCTTTTGCT
GATTATTTAA GTGCAGAAGG GCATCACGTA TGGCATCTGG ATCTGGATGC CAGCGCGCAA
TATAACGATT TACCCGATCT GATCGCGCAG ATTTGCCAGC AAGTTCAGGC CGATGCTTTC
CAATACCAAA GACCTGACGA GTATCGACTG CTTGAGCAAA TGGCCAATTT GCGCCTATCC
GGCATCACAA TAGGGTGCGT TGATACTGAG CACTTCTTGC TACCGTTTGC GGAGATCCCA
GAGCAATTTC CCGCAAGCAA AGCCGTGCTG ATGGAACACT TTTATCGACG AATGCGTAAG
CGTTTTGGTT ATTTGATGAC GGCTGATGGC AAACCTGAAG GTGGACAGTG GAATTTTGAT
GCCGACAATC GTAATAAACT GAAATCGCCA GATCTTCTTC AGTTGCCGAC GCCACTCTGT
TTTGATAATC CCGTTGCGTC CATCAAGGCG CGAATAGAAC GTCATCGGAT TCCGTCTATC
GGACAAGTCG GAGAGTCACT GCTGTGGCCT ATCAATCGTG CGCAAGCGCT TTCCTTATTG
GCGCATTTTT GCCAAATTTG CTTGCCTAAT TTTGGTCGCT TTCAAGATGC GATGACGGCG
CAGCATCCCC ATCGCTGGAG CCTGTATCAC AGCCGACTTT CATTTGCGCT CAATAGTAAG
CTACTTTCAC CTCGCGAAGT GATTGAAGCT ACTATTAGTG CTTATCGCGC AGCTCAAGGG
CAGATCTCGT TAGCTCAAGT GGAAGGATTT GTGCGACAAA TTCTCGGTTG GCGTGAATAT
GTGCGCGGCA TGTATTGGAG CAATATGCCT CATTACCAAA CACGCAATCA TTTAGGAGCG
CAGCGGCCGT TACCAAGCTA TTTCTGGAAT GGACAAACCA AGATGCGTTG TTTGCAGCAG
GCGATCACTC AGTCACTGGA TTTTGGCTAC GCGCATCATA TTCAACGCTT GATGGTGACA
GGGAATTTTG CCTTGCTGAC CGAGTGTGAC CCTGATCAAG TCGATGCCTG GTATTTAGGT
ATCTATATCG ATGCGATTGA ATGGGTCGAA CTTCCTAATA CGCGAGGTAT GGCTCTGTTT
GCGGATGGCG GATTGATCGC CACCAAACCC TATTCAGCCA GTGGTTCCTA CATCAATAAA
ATGAGTGACT ACTGCGCCTC TTGTGCTTAT CAAGTGAAAC TCAAATCCGG AGAGAAAGCG
TGCCCGCTAA ATTCGCTTTA CTGGCGGTTT ATGCTTAAAC ATCGTGATCG ACTCGCCAAC
AATCCTCGCA TCGGAATGCT ATACAAAACG TGGGACAAGA TGACGAGCGA TTCTCAGCAA
GCGATCCTGA GCACGGCTGA TGCGTATCTG AGCCAGATTG AAAGTTTATA A
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| Protein sequence | MRYSVVRLIL GDQLNHAHSW FSEHRDDVLY LIAELHQEQE YVRHHIQKQC AFFAAMQAFA
DYLSAEGHHV WHLDLDASAQ YNDLPDLIAQ ICQQVQADAF QYQRPDEYRL LEQMANLRLS
GITIGCVDTE HFLLPFAEIP EQFPASKAVL MEHFYRRMRK RFGYLMTADG KPEGGQWNFD
ADNRNKLKSP DLLQLPTPLC FDNPVASIKA RIERHRIPSI GQVGESLLWP INRAQALSLL
AHFCQICLPN FGRFQDAMTA QHPHRWSLYH SRLSFALNSK LLSPREVIEA TISAYRAAQG
QISLAQVEGF VRQILGWREY VRGMYWSNMP HYQTRNHLGA QRPLPSYFWN GQTKMRCLQQ
AITQSLDFGY AHHIQRLMVT GNFALLTECD PDQVDAWYLG IYIDAIEWVE LPNTRGMALF
ADGGLIATKP YSASGSYINK MSDYCASCAY QVKLKSGEKA CPLNSLYWRF MLKHRDRLAN
NPRIGMLYKT WDKMTSDSQQ AILSTADAYL SQIESL
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