| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0393 |
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| Symbol | gapA-2 |
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| ID | 5133931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 437861 |
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| End bp | 439390 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530716 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_001215234 |
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| Protein GI | 147671771 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTATAAAA ATAATCTGTA TCAACACTCT CTCAAAGCTG TGGCGATGCC CAGCGAGGGA
ATTAACTCTA ACGTGAAAGG TCCCAAGTCA ACCATGAGTC CAGAGAACTA CTTTCTAGAC
TGGCAAAAAA GCCAAACCCT TGCAGAAACC CTGTCTCCCT TAATTGGTCA ACTCTATCGC
CAGAAAGGGG TTGAAGCCGT GTTGTGCGGT AAAACCCTGA TTAATGCGAC CACGATCGAC
ATCATTAAGA CTCACCGTGT CGCTCGGCGC TATTTAAGTG AGCCTTTGGC ACTCGATAAG
ACCTTACCCT TAGTGCAGCA GTTATCGACG CTTGAGTTAG CCCCCTGCCG AATTGATATT
GGCCAACTTG CCAGCCAGTA TTGGCAGCAA CATGACGATG AGCATGGTTT GAATGATTTT
CTGCACACCG CATTAGACGC CGCACTACAA CCCGCTCAGG CTATTGAGCC CAAAGATGTG
GTGCTGTATG GATTTGGCCG AATTGGCCGT CTACTCGCTC GCTTACTGAT TGAAAAGAGC
GGCGCAGGTT ATCCGTTGCG TCTACGGGCG ATTGTTGTAC GTGGTGGAAA AGAGGGCGAT
CTTGAAAAAC GTGCCAGTCT GCTCCGTCGA GACTCGGTTC ATGGTCAATT CAACGGCAGT
ATTACTATAG ATAAAGAGCG TAAAGCGCTG ATCGCAAACG GTAACTTCAT CAACGTCATT
TATGCGAATT CCCCTCAAGA TGTCGATTAT ACCGCTTACG GCATTCATAA CGCTTTGGTG
GTGGATAACA CGGGCGTATG GCGCGACAGC GAAGGCTTAA GCCAGCACCT TGCCTCTCCG
GGAGCGAGTA AGGTTCTGCT TACTGCGCCC GGTAAAGGCG ATATTAAAAA CGTGGTGTTT
GGGGTCAATG AATCGGTGAT TCAGCCGGAA GACACCATTA TTTCAGCGGC AAGTTGCACC
ACAAACGCGA TTACTCCGGT GTTAAAAGCG GTGAATGACC GTTTCGGCAT TACTTCTGGA
CACATCGAAA CCGTCCACTC TTTTACCAAT GATCAAAACC TGATCGATAA CTTCCACAAA
GGTGAGCGTC GTGGTCGAGC CGCATCACTC AATATGGTGC TTACTGAGAC AGGCGCGGCT
AAAGCCGTTG CTAAAGCGCT GCCTGAGTTA ACTGGCAAAC TGACGGGTAA TTCGATTCGC
GTACCGACTC CGAATGTGTC GATGGCGATA GCCAATCTCA ATTTAGCTCA TGCCACGACT
AAGCAAGAGC TGAATGCTTA CTTGCGAGAA ATGGCTACCC ATTCTCCACT CTCAGGACAA
ATTGATTACA CCGAGTCGAC TGAAATTGTT TCCAGCGATC TGGTGGGTTC ACGTTATGCG
GGCGTGGTCG ATGCCACAGC AACGATTGCA CAAGATAGCC GTTGTGTTCT GTATGTTTGG
TATGACAATG AATTTGGTTA TAGCTGCCAA GTGGTACATT GCATGGAACA GATGATGGGT
GTGCGTTACC CGACCTATCC CGCTCAATAA
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| Protein sequence | MYKNNLYQHS LKAVAMPSEG INSNVKGPKS TMSPENYFLD WQKSQTLAET LSPLIGQLYR
QKGVEAVLCG KTLINATTID IIKTHRVARR YLSEPLALDK TLPLVQQLST LELAPCRIDI
GQLASQYWQQ HDDEHGLNDF LHTALDAALQ PAQAIEPKDV VLYGFGRIGR LLARLLIEKS
GAGYPLRLRA IVVRGGKEGD LEKRASLLRR DSVHGQFNGS ITIDKERKAL IANGNFINVI
YANSPQDVDY TAYGIHNALV VDNTGVWRDS EGLSQHLASP GASKVLLTAP GKGDIKNVVF
GVNESVIQPE DTIISAASCT TNAITPVLKA VNDRFGITSG HIETVHSFTN DQNLIDNFHK
GERRGRAASL NMVLTETGAA KAVAKALPEL TGKLTGNSIR VPTPNVSMAI ANLNLAHATT
KQELNAYLRE MATHSPLSGQ IDYTESTEIV SSDLVGSRYA GVVDATATIA QDSRCVLYVW
YDNEFGYSCQ VVHCMEQMMG VRYPTYPAQ
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