| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0365 |
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| Symbol | cydA-2 |
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| ID | 5134587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 399575 |
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| End bp | 401167 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530688 |
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| Product | cytochrome d ubiquinol oxidase, subunit I |
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| Protein accession | YP_001215206 |
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| Protein GI | 147671656 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGAGCTT TCATGATTGA TGTTGTTGAA TTATCGCGTT TGCAGTTCGC ATTAACGGCC
ATGTTTCACT TTCTCTTCGT CCCTTTAACC ATAGGGATGT CTTGCCTACT CGCTATCATG
GAGTCGATTT ATGTACTCAC AGGGAAGCAG ATTTACCAAG ACATGACCCG CTTTTGGGGC
AAGCTCTTTG GAATAAACTT TGCGTTAGGT GTGACGACGG GTTTAACCAT GGAGTTTCAG
TTTGGAACCA ACTGGTCTTA CTATTCACAT TATGTTGGCG ATATTTTTGG TGCTCCGTTA
GCGATTGAGG CTCTCGTCGC CTTTTTTCTG GAGTCCACTT TTGTGGGCCT GTTCTTCTTT
GGTTGGTCAC GCTTGTCAAA ACGCCAGCAT TTGCTCATCA CATGGCTAGT AGCCCTAGGA
TCTAGCTTTT CTGCCTTGTG GATCTTGGTT GCAAACGGTT GGATGCAAAA TCCCGTCGGA
GCAGAGTTCA ACTATCAAAC CATGCGTATG GAAATGACCA GCTTTGCCGA AGTGGTATTA
AACCCGGTCG CGCAGGTGAA ATTTCTCCAT ACTGTCGCAT CCGCTTACAC CTGTGGTGCA
ATGTTTATTC TCGGGGTGAG TTCTTATTAC TTATTGCAAG GCCGTGACAT CGAGTTTGCG
CGCCGTTCAT TTGCCATCGC CGCCACTTTT GGTATGGCAG CCATTATCTC AGTGATCGTA
TTGGGGGATG AGTCGGGCTA TAAACTTGGC GATGTCCAAA AAGTAAAGTT GGCCGCGATT
GAGGCAGAAT GGCACACCGA ACCAGCCCCA GCAGCGTTCA CTCTGTTCGG CTTACCCAAT
CAGAAAGAAG GTAAAACCGA TTATGCCATT AAAATTCCCT ACCTCATGGG GTTAATCGCC
ACCCGTTCGT TTGATGAACA AGTAACAGGG CTCCACGATT TACGCCATGA ACATCTACTA
CGCATTCGTA ACGGAATGGT GGCTTATCAA CTACTTGAAC GGTTACAGGC TGGTGATGCA
TCCGTAGAAA CACAACGAAA ATTTGAGCAA ACGAAGCATG ACCTCGGCTA CGGGCTGTTA
CTCAAGCGTT ATACCGATAC CATCACAGAT GCCAACGAGG CACAGATCCA GCAAGCAGCA
GATGATTCCA TGCCTACTGT GTGGCCACTG TTTTGGTCAT TTCGCATCAT GGTTGGCTGC
GGCTTCATTA TGCTGTTTGT ATTTGGTGCC GCCTTGCTAC AAACCTGCCG TCAACGCATC
ACTCATAAGC CTTGGGTACT CAAAGCTGCG CTCTGGTCAA TTCCATTGCC ATGGATTGCT
ATCGAGGCGG GTTGGTTTGT CGCCGAATAT GGTCGTCAGC CTTGGGCAAT CGGTGAAGTC
CTTCCCGTCA CGGTTGCCGT CTCATCCCAA ACGTTCGAAA ACTTAATCAC TTCGCTCGCC
ATCATTCTAA GTCTTTATAC CGTTTTTATT TTTGTGGAAA GCTATCTCAT AGTCACCGTT
GCTCGAAAAG GACCCAGTAG CTTAAAAACT GGTCGCTATC AGGACGAACA AAGCTTATAC
GAGCATAAGT TGGCACAACA AGTACAATAT TAG
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| Protein sequence | MGAFMIDVVE LSRLQFALTA MFHFLFVPLT IGMSCLLAIM ESIYVLTGKQ IYQDMTRFWG
KLFGINFALG VTTGLTMEFQ FGTNWSYYSH YVGDIFGAPL AIEALVAFFL ESTFVGLFFF
GWSRLSKRQH LLITWLVALG SSFSALWILV ANGWMQNPVG AEFNYQTMRM EMTSFAEVVL
NPVAQVKFLH TVASAYTCGA MFILGVSSYY LLQGRDIEFA RRSFAIAATF GMAAIISVIV
LGDESGYKLG DVQKVKLAAI EAEWHTEPAP AAFTLFGLPN QKEGKTDYAI KIPYLMGLIA
TRSFDEQVTG LHDLRHEHLL RIRNGMVAYQ LLERLQAGDA SVETQRKFEQ TKHDLGYGLL
LKRYTDTITD ANEAQIQQAA DDSMPTVWPL FWSFRIMVGC GFIMLFVFGA ALLQTCRQRI
THKPWVLKAA LWSIPLPWIA IEAGWFVAEY GRQPWAIGEV LPVTVAVSSQ TFENLITSLA
IILSLYTVFI FVESYLIVTV ARKGPSSLKT GRYQDEQSLY EHKLAQQVQY
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